Gene Dde_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0954 
Symbol 
ID3755565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp977354 
End bp980902 
Gene Length3549 bp 
Protein Length1182 aa 
Translation table11 
GC content64% 
IMG OID637781821 
Producthypothetical protein 
Protein accessionYP_387450 
Protein GI78356001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT CACGTGAGAC ATTCGACCCG ACCAAGAATT ACAAGCGCAT CCGTTACCAT 
CAGGATCGCG ACCTGCTGGA TTCAGAACTC AACGAACAAC AGGACATCGT CAACCTGGAG
CGGCGCAAGA TCGCCGACAT CCTGTTCAAG GAAGGCTCCA TCATCATGGG CCTCGAGGTC
AGCGCGGCCG CCAACATCCT GACCCTGGCC CCGGGCGTGG TCTACATCGA CGGCCACCTG
GAACAGGTGA GCGGCGCGAC CCTGACCTAT GACCCGGCCA CCACCAGCGG GGCCGATTAC
GTCTATGTGG AGCTGCTGAA GTACAACTAC GGCTACACCC AGGACCCGGC CCTGATCAAT
CCGGCCACCG GCGAGCCCAC CGCCGAAAGG GAAAAATGGG TTCTTTCTCT CAAGGCGACG
GACACCAGCG GCCAGACGCT GCCCAACAAC GTGGCCGAGC GCCGGGTGAT ACCGATCTAC
AAGTTCGACC GCGAGAGCGG CGACGTCACG CCCACGGTGC AGGAGAAATC CAACCTCTAC
CTGCGGGATC TGCTGGGCAC GCTGCCGGGC AGCCGGATCA CCGTCTCCTC GATCACCGAG
GACCAGCTCT CCTTCGCCGC CGCCGAGGGG CTCAACTCAC TGATTCAGAA CCTGGCCGAG
CGCACCTTCG ACCAGGCCGG AAGCTATCTG GTGCGGGGCT TCGACACCTT CATCGGCGGC
GTCGACGACG ACAGTGTGGA GGCGATCACC AACGCCGGAC GCGCCTACAT CCAGGGCTTC
CGGCATCAGC GCGATCTACC CACCTCGTCC CTGGTGCCCA AATCCATCGC CACCAAGTCG
GTGCGCGGCG AGCAGAAAAC CTTCGACATC AACAAGCGCC GCTATCCGGT CAACTCCACG
CCACTCAAGG AAACGACCCA GGTGGAGGCC ATCGTCGAGA TCACCCGCAA CGTCACTCGC
GGCTCGGTGG GCGGCGGCGA AGACCTGCTC GACCCCAATC CGGTGGTGGA CATCCTCGAG
GTCAGCCAAG GGGCGACCAT CTTCCAGGAG GGCGTGGACT GGCAGCAGTC GGGCAACCAT
GTCGACTGGC TCGGCTCCGG CAACGAACCG GCCATCGGCA CCACCTATAC GGTGCGCTGG
ACCTACACCA AGCAGATGAT CAAGGGCACC GACTACGTGG ATAGCGGCTG GTTCGGACAG
GCCAACCATC CAGCGGCCGG AAACTATTTC TATCTGGTGA CCGCCTACAA CGCCACCGGC
GAGACGGCCT TCAACGCCGC TGCGGTCATT GCCCGGGCCA CCGCCGCCGG GGAGATGAAC
AAGCTCTCCT GGCTGCCGGT CAGCGGCGCG ACCGGCTATC GCGTCTACCG GGCCGCCACC
AACGGCGCAC GCACCGACTA CAAGCGCCTG ATGGAACTGG GCAGCGATGC GCTCTCCTAC
GTCGACGACG GCGTCGAGGA GATCGGCACC GCTTCGCCTC CGGCCACCAA CACGGCCGGA
CTCACCATGT CGCCGGTCCA GCTCGAGCTG GGCAACCTCA ACGTGATCAA CTTCGGGCGC
GGCAGCCTCG GCGACCAGCC GGTGAACGGC TCCAACTGCA GCCTGGACTA CGACTATTAC
CTCGGCCGCC GCGACATCGT TTACGCCACC ACCACCGAGA TCAAACGGCT GGAAGGGGCT
CCTGCCGATT TTCCGAAGCT GCCCATCGTG CCGGAAAACG CCCTGGGGCT GTGCAGCATC
GACTGCCCGC CCAACTCCAC CGACATGGAG ATCCGCAACT TCGGCCTGAC CCGCATCACC
ATGGACCAGA TCCACGACAT CATTCAGGAC GTCGAGGACC TGAAGTACAA CGATGCCCAG
TACCAGATGA ACAACGAGCT GCAGAACCGG GACGCCCAGA CCAAGAAAGG TATCTACTCG
GACGACTTCT CGAACACCGC CCAGTCGGAC ATCTACCACG CCGAATGGGA CGCCCGAGTA
AACGAGATCG CCCGCTTCGT CGCGCCGGAC CGCATTCCGC ACTCCACCGT GCTCTCGGTC
GATCAGGCGG GCAGCAACGC CAGCTTCTTT GGCAGCCTGG CGCTGCTGCC GGGCAACGAG
ACCGTGCTGG TGGAGCAGAA CGACTGGTCC GAGGAGCGCA ACATCAACCC CTACGCGGTG
TTCGACAAGC CCCCGGCCAT GCTGCAGATC ACGCCCAACC TCGGGCGGCG CGGCCAGACC
GGCATCGCCG TCACCGGCAT CAACTTCACC CCGAGCAAGT CCGGCATCGT GCTGCGCTGC
GACGGCCAGG TGATGGCCAG CAACCTGATC AGCGACGAGG CCGGTCGGGT CAGCGCCTCC
TTCACCATCC CGACCAACGC CCGCAACGGC AACCGGATCG TGGAGATGGC CGACGGCGTC
TACTCGGCCC GGGCCAGCCT GCAGATCAAC GATCCGCTGG TCATCACCCG CATCGAGCGC
ATCATCGAGA ACCGCATCAT CCGCGTGCCC GTGGTGCAAG TGGTCTGGCG CACCCAGACC
ATCTTCGTGC CCCGCGATCC GCTGGCCCAG ACCTTCAGTT TCACCCAAAA CCAGGTGATC
TCCAGCATTG GTCTGCAGTT CACCGCCAGG GACCCGAGCA TCCCGGTCAC GGTGCAGATT
CGCGGCGTCA CCACCGGTCT GCCCAACGGC GTGGTGTTCG CCGAGAAGGT GCTGGCCCCG
AACGAGATCA GTCTGAGCGG CGAGACCCGC ATTCGTTTCG ACGACCCGTT CTACGCCGAG
GCCAACACGA GCTACGCCGT GGTGCTGCTG ACCAACAGCA CCAACTACAA GGTGCGCACC
GCCACCCTGG GCAAGATGGG CCGCTGGGGC ATCATCACCC GGCAGACCTA CATGGAGGGC
GTGCTGCTGG AGAGTTCCAA CGCCGAGACC TGGACGCCGC TCAACGGCTC CGACCTGGCG
ATGAAGATCT ACGGCTACAA CTTCCAGTCC GAGGGCATGA TCCGCTTCCA GCCGATCAAC
GGCGTGCAGT TCTCCGATAT CAACCTCGAC GAATACTCGG CCATCCCCCA GGGCACCGGT
CTCGACTGGG AATACTCCAC CGACGGCGGC GTGACCTGGG ACGCCATGGT TCCCGCCGAG
GAGGAACGGC TGCCCAACCT CGCCACCCGG GTCCAGATCC GCGTGCGCCT GAGCAGCTCG
CTTCCCAACG ACACCCCGGC CATCAACTTC CGCGACGTCA ACCTGGTGGG CTACCTCAAC
AAGACCACCG GGGCCTACCT GACCCGCGAG AACGAGCTGA CTCAGGGGGT GGAATCGACC
AAAGCCTATG TGCAGATGCA GATCCCCAGC GGCACCACCC TGCAATGGTT CGCCAGCAAC
GACGGCGGCC TGACCTGGGA GGCGATGACC GTCCAGGACA CCCGGCCCAT CGACGAGAAC
TGGACCGAGT ACACCCTGGT GCGAACCTTC ACCGACAACA CCGGCAACAA GGTCCGTTAC
AAGGCCGAGA TGACCGGCAC GCCGCTGATC TACCCGCGCA TCCATTCGCT GGGCGCAACC
CTGAGCTAA
 
Protein sequence
MSISRETFDP TKNYKRIRYH QDRDLLDSEL NEQQDIVNLE RRKIADILFK EGSIIMGLEV 
SAAANILTLA PGVVYIDGHL EQVSGATLTY DPATTSGADY VYVELLKYNY GYTQDPALIN
PATGEPTAER EKWVLSLKAT DTSGQTLPNN VAERRVIPIY KFDRESGDVT PTVQEKSNLY
LRDLLGTLPG SRITVSSITE DQLSFAAAEG LNSLIQNLAE RTFDQAGSYL VRGFDTFIGG
VDDDSVEAIT NAGRAYIQGF RHQRDLPTSS LVPKSIATKS VRGEQKTFDI NKRRYPVNST
PLKETTQVEA IVEITRNVTR GSVGGGEDLL DPNPVVDILE VSQGATIFQE GVDWQQSGNH
VDWLGSGNEP AIGTTYTVRW TYTKQMIKGT DYVDSGWFGQ ANHPAAGNYF YLVTAYNATG
ETAFNAAAVI ARATAAGEMN KLSWLPVSGA TGYRVYRAAT NGARTDYKRL MELGSDALSY
VDDGVEEIGT ASPPATNTAG LTMSPVQLEL GNLNVINFGR GSLGDQPVNG SNCSLDYDYY
LGRRDIVYAT TTEIKRLEGA PADFPKLPIV PENALGLCSI DCPPNSTDME IRNFGLTRIT
MDQIHDIIQD VEDLKYNDAQ YQMNNELQNR DAQTKKGIYS DDFSNTAQSD IYHAEWDARV
NEIARFVAPD RIPHSTVLSV DQAGSNASFF GSLALLPGNE TVLVEQNDWS EERNINPYAV
FDKPPAMLQI TPNLGRRGQT GIAVTGINFT PSKSGIVLRC DGQVMASNLI SDEAGRVSAS
FTIPTNARNG NRIVEMADGV YSARASLQIN DPLVITRIER IIENRIIRVP VVQVVWRTQT
IFVPRDPLAQ TFSFTQNQVI SSIGLQFTAR DPSIPVTVQI RGVTTGLPNG VVFAEKVLAP
NEISLSGETR IRFDDPFYAE ANTSYAVVLL TNSTNYKVRT ATLGKMGRWG IITRQTYMEG
VLLESSNAET WTPLNGSDLA MKIYGYNFQS EGMIRFQPIN GVQFSDINLD EYSAIPQGTG
LDWEYSTDGG VTWDAMVPAE EERLPNLATR VQIRVRLSSS LPNDTPAINF RDVNLVGYLN
KTTGAYLTRE NELTQGVEST KAYVQMQIPS GTTLQWFASN DGGLTWEAMT VQDTRPIDEN
WTEYTLVRTF TDNTGNKVRY KAEMTGTPLI YPRIHSLGAT LS