| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0934 |
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| Symbol | |
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| ID | 3755584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 959837 |
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| End bp | 963472 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637781801 |
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| Product | Phage tail tape measure protein TP901, core region |
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| Protein accession | YP_387430 |
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| Protein GI | 78355981 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCG ATCTCGGACT GGGCATAGTG GTATCGATGA AGGATGCGTT CTCGCAGAAC
GCGCAGCGCA TCCGTGGCTC CATGATGGAC CTCGATTCCA CCGTGGCGGA TGCCAGCGAG
CGGATGACCC GCAACCTGGA CCGTATCCAG CAAGGCACCA TGATGCTTGG GGCGGGGCTG
GCCCTGATGG CAGTGCCCGC CGCCTTGGTC GCCTCCACCG CCGCGACCCA GAAGGCCCTG
GGAGAGCTGG CGTCCTTGGG CGTGCAGGAT CTCCGTGCCA TCGAGGACGC CGCCGAATCC
TTCACTAACC AATGGTCCGG TGCCGACAAG GCCGCCTTCA TCACCGCCAC CTACGATGTG
AAATCGGCCC TGTCCAACCT CAGCGACGAG GCGGTGGGCG TCTTCACCTC CATGGCCGCC
ATGACCGCCA AGGCGACCAA GGCCACCACC CAGGAGATGG TCGGCACCTT CACCACGGCC
TACGGGATCT TCAAGCCCAT CATGGCCGAC ATGAACGACA TGGAATGGGC GACCGCCTTT
TCCGGAGCCA TGGCGCAGAC CGTGGCCTCG TTCAAGACCA ACGGCACCCA GATGGCCGAC
GCCATCAAGA ACATCGGCGC GGTGGCGGCC GCGAGCAATA TTCCGCTGAA CGAGCAGCTC
GCCGTGCTCG GTCAGCTCCA GACCACCATG CCCGGCTCAG AGGCGGGCAC GCTGTACAAG
GCGTTCATCA TGAAGGCGGC CGAGGCCGGT GACGAGCTTG GCCTGTCCTT CACCGACACC
AGCGGCCGTC TCAAGGGCGT GGTTCCCATC CTGCAGGAGA TCAAGCGCCA GTTCCCCGAT
CTCTCCAACG CCGCCGCCCA GGTGAAGCTG AAGAAGGCCT TCGGCTCCGA CGAGGCGGTC
AAGTTCCTGC TGCAGATGTC GGCGGGCATG GAGAGCCTCG AAGGGAATAT CCAGTCGGTG
GGCCGGGCCA TGAAGACCGG CACGGCGGTC ACCGAACAGA TGGCCGACGC CATGAACCAG
GATATCGGAG CCCGGTTCCT GCTCCTGCGC CAGCAGATGG CCAACCTCAG CGAAATCCTG
GGTCGCACGT TGTTGCCGGT GGTCACGCCG GTGATAAACG GCGTCTCCCG CGTCATTCTG
TTCCTGCAAC GCATGGCCAA ATCGATGCCG GGTGTGACCC GGGTGGTCCT GGGGCTGTCC
ATGGCCCTCG GCACCATTCT GGTCGTGGCC GGAGCCGTCA CCGCCGCCGT GGGCATGGTG
GGACTCATGC TTCCAGCCAT CAAGGCCGGG TTCGTGGCCA TCAGCGCCGC GTTGGCCGGG
GTGGGTTCGG CGGTCGCGAC CTATTTTCTG CCCGTCACCG CGATCATCGC GGGCGTGATC
CTCTCGGTGT ATCTGCTCAA ACGCGCCTGG GAAACCAACT TCGGCGGCAT CCAGGACGTC
ATAACCGGGG CCTGGAACAA GGTCTCGCTG GTGTTCCGGG GGGTCAGAGA GCTGGTGGGT
TCGCTCAGCG GCGGCGTCGG ACAGATGTCG GCCGAACTGG CCCAAAAGCT CGAATCCGCC
GGTCTGCTGG GCTTCGTGGT CACCGTCTTC AAAGCCTATT ACCGCGTTCG TGAGGCCCTG
GCCGGATTGT GGGGCGCTTT TTCCCATGCC TTTGGCCGCA TCCGCGCCAT CCTCGAACCG
ACCGTCCGCA CCCTGATGAG CGCCTATGCG GCGCTGGCCA GCGCGGTCTT TTCGGTGGTG
GAGATTTTCG GTGTGGCGGC CAGCGCCACC GATGGTTCGT CCTGGCGAAC GTTCGGCACA
GTCATCGGCA CTGTCGCCGG TGTGCTTCTT CAGGGGTTGG CTTTCGCACT CAAGATCGTG
GCCTGGAACC TGTCTCTCAT CGTCCGAGCC CTGGCGGTCG TAGTGCGCAG CGTGGTCTGG
GTCGGCAAGA TCATCGTCGG CACTTTGGTC GGTGCCGCCA AGTTCATCTA CAAGTTTCTG
TTGCCCGTGC GGATGATCGG CGAGGCCTTC GTGGCCGCTG GGAAGATCGT CTATGCGGTC
TGGCAGGTGC TGAGCGGAGA TATCTCTCTG CTCGACGGCC TGAAGGCCAT TGGCGGCGCG
GTCTACGATT TTCTGGCCAC CCCGTTTCGC TGGGCGCGGG ATGTGGTGGT CGGCGTCTGG
AATTTCATTT CCGGCATTTT CACCTCCATC GGCCGCCTGG TGGCCGACGC CGCCGGACAG
ATCGGCCAGG CGATTCTGAA TCTGCCGATC ATCAGCACCC TGCGGGATCT GTTTGCCACC
GTGCGCTCCT TCTTCGCCGG GGATACCACC TTTTTCGAGG CGGGCAAGAA GCTACTGATC
ACCCTTGGCG AAGGGATCTG GTCGGCGGTG ACCTATCCCT TCACCATGCT TAAGAACGCC
CTCGGCAAGC TGCGCAATCT GCTGCCGTTC TCCGATGCCC GCGAGGGACC ACTCGCCAGC
CTGACCGCCT CCGGTTCCGC GCTGCTCAAG ACCCTCGCCG ACGGCATGAG CCTTACCCAG
TCGCTGCCCG CGAAAGTTTT CGGCTTCGCC GCTCGCGGGA TTCTCTCGGA CGCTGCGGGA
GCCTGGCAGC AGATCAAATC GGCGGGCGGC AACCTCATGG AAGCCGCCTC GGCTCCCTTC
CGGATGGCTG GAAAACTCTG GGATGGGCTG ACCACCGGGG CTCAATCCGT CGCGGCCAAG
GCCGGTGCCA TCTTCGGCGG TCTCAAACAA TCCCTGTTTG GCGACACGCC CGAACTGGCG
CTCACGCCGC CCCAGGTCAA TACCTGGGAC GCGCTGGCCA CAGGAGCCGT CAATCTCCGC
GACCGGATCG TTGCCACGCT GTCTGCCGTC CCCGGGGCTG TCGGTCGAAT CTTTACCAAC
GCCGGTGCCG AGGGGCAAAC CCTCTGGCAG AGGCTTTCCA CCGGCGCGAG CGCGGGCATT
CAGGCGATCA AGGATAGAAG CGCTGGGATC GCCAACGGTT TGCTCTCCTC CGCTCGTGCC
ATGCTGGGAG TCCAGACCCC GATTCCGCAG GTGGCCGAGC AGAAGCAAAC ACTCGGAGCT
GCGCAGCCCG CCGAATCGAT TGGGCAACGC ATCATCGAAA GCGTGCTGAG TCTCGTGCCG
CGTCTGGACG AGCGCCTGGT GCCCAAGGCC CTGAGCGCCA TGCTGATGCT CCAGCCGGTC
ATGGCCACTG CCGCGCCGCC TCCGCAACCG ATGAACGGCA TCGTGCAGAC CGTCGCAGCG
GCCGTCGAGC CGGTAAGTAA GAGCTATATC CAGCCGTTCG CGGTGGAACC GCCACTGGAA
AACGGAGATG CCTCTCTGGC TCCGGCCGGG ATCGAGCGGC CCAAGACAAC CGCGCCGACT
CCGATAGCGA AGCCCCTGCA ATCCGGACTC ACCGAGACGG TGCCTTCCGA ACGGTTGATC
GCTCCGGCCC GCACCGCTCC CGCGACACCC ATGCGCGGAG AGGAAGCCGG TCCGGGAGTG
CGCGAACTGC TGGAATCCCT GCTCTCGCGC CTCGATGGCC TGGCCGACCG CCCGGTGGAA
TTGAGCGTGA CCACCAACAT CGATGGTCGG AAGGTGGCCG AGGCGGTCTA CAAGGACCTG
CGGGAGCGGA AGATCAGAAA CTACGAAACC CTGTGA
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| Protein sequence | MNGDLGLGIV VSMKDAFSQN AQRIRGSMMD LDSTVADASE RMTRNLDRIQ QGTMMLGAGL
ALMAVPAALV ASTAATQKAL GELASLGVQD LRAIEDAAES FTNQWSGADK AAFITATYDV
KSALSNLSDE AVGVFTSMAA MTAKATKATT QEMVGTFTTA YGIFKPIMAD MNDMEWATAF
SGAMAQTVAS FKTNGTQMAD AIKNIGAVAA ASNIPLNEQL AVLGQLQTTM PGSEAGTLYK
AFIMKAAEAG DELGLSFTDT SGRLKGVVPI LQEIKRQFPD LSNAAAQVKL KKAFGSDEAV
KFLLQMSAGM ESLEGNIQSV GRAMKTGTAV TEQMADAMNQ DIGARFLLLR QQMANLSEIL
GRTLLPVVTP VINGVSRVIL FLQRMAKSMP GVTRVVLGLS MALGTILVVA GAVTAAVGMV
GLMLPAIKAG FVAISAALAG VGSAVATYFL PVTAIIAGVI LSVYLLKRAW ETNFGGIQDV
ITGAWNKVSL VFRGVRELVG SLSGGVGQMS AELAQKLESA GLLGFVVTVF KAYYRVREAL
AGLWGAFSHA FGRIRAILEP TVRTLMSAYA ALASAVFSVV EIFGVAASAT DGSSWRTFGT
VIGTVAGVLL QGLAFALKIV AWNLSLIVRA LAVVVRSVVW VGKIIVGTLV GAAKFIYKFL
LPVRMIGEAF VAAGKIVYAV WQVLSGDISL LDGLKAIGGA VYDFLATPFR WARDVVVGVW
NFISGIFTSI GRLVADAAGQ IGQAILNLPI ISTLRDLFAT VRSFFAGDTT FFEAGKKLLI
TLGEGIWSAV TYPFTMLKNA LGKLRNLLPF SDAREGPLAS LTASGSALLK TLADGMSLTQ
SLPAKVFGFA ARGILSDAAG AWQQIKSAGG NLMEAASAPF RMAGKLWDGL TTGAQSVAAK
AGAIFGGLKQ SLFGDTPELA LTPPQVNTWD ALATGAVNLR DRIVATLSAV PGAVGRIFTN
AGAEGQTLWQ RLSTGASAGI QAIKDRSAGI ANGLLSSARA MLGVQTPIPQ VAEQKQTLGA
AQPAESIGQR IIESVLSLVP RLDERLVPKA LSAMLMLQPV MATAAPPPQP MNGIVQTVAA
AVEPVSKSYI QPFAVEPPLE NGDASLAPAG IERPKTTAPT PIAKPLQSGL TETVPSERLI
APARTAPATP MRGEEAGPGV RELLESLLSR LDGLADRPVE LSVTTNIDGR KVAEAVYKDL
RERKIRNYET L
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