| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0907 |
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| Symbol | |
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| ID | 3755635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 932194 |
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| End bp | 935490 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637781774 |
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| Product | Zn-finger, CHC2 type |
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| Protein accession | YP_387403 |
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| Protein GI | 78355954 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.696757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGTT CAGACAATGT CAGAGAATAC TACCGCCTGA TAACCGAGCT CGATATCGGA
GATGTGGCAA GGGATCTTCT GGCCGGAAGG ATCACACAGG AATCCCGGCA GCGGCTTCAG
TGCGATTGTC CGCACCACCA GAGTCAGTCC CGTCGCTCCC TTCATGTGAT GCTCGACAAA
CAGGGCTGGT ATTGCTTCGG CTGCGGTGTG GGCGGAGATG TCCTCCAGCT CGTCGAGTTT
GTTCAATCGG GAACGGTTAC GGCCGGTCAA TCCGGTCCCA TGCCCGACAG CCATCGGCAG
GCCCGTGACT TCCTCGCTGG TAAAGCCGGG ATGCCGCCAC TGTCGCGTTA TGGCCTCACG
CAGGAACGAT TGGAGCAGAC GGAAAACGAT CGATCGTTTG AGATCCGGGT CAAAGATGCC
CTGACCGAAC TGGCCCGCTA CTATCACCAG CGGCTCAAGG AAAATCAGGA GGCGCTGACC
TGGCTGAAGG AAAAGTACGC CATCAGTGAT GAGACCATCG ACGACCTGCT GATCGGTTTT
GCCGACAATG AATCCGGTGT CATTGCAGCT CTGCGCTCCG GCGAACATGG CTTCAGCAAA
CGGGAGCTTT CCGCCACAGG TGCCTTTCGC CCGACCAGTC AGGATGGATT GAATCCGTTT
TTTGAGAAAC GCATCATTTT CCCATACTGG AGCCGTGGTC GTGTCGTGTT TATGATCGGC
CGCAAAACAC CGTGGACTCC GGACGTAAAC TGGGAACAGG GAAAGTACAA GAAGCTGCCG
GTTCACGATG AACATCAGCG CCCTTATGTC GCCCGCTTCA TCAACAATGC GGTGCTGTTC
AATGAAGACT GCCTGCTGGG CAAGCCCGAT CACATCATCA TTACCGAAGG TGTGACCGAT
TGTATTGCTC TGATGCAGCA GGGATTTCCC GCGCTCTCTC CTGTAACGGT AAGAATCAGG
GCCGCAGACT GGGAACGTCT GGTTCCAAAG ATGCGCGGAC TCAAGACCGT CTATATCTGT
CAGGACAATG AAATCTCGGA GGCCGGGCTC AAGGGAGCCT TGCAGACTGC TCGCACGCTG
GCCGAACACA AGATTGATAC GAAGCTGGTT ACCATTCCTC TGAATGAGCC CCAGCAGCAG
GCTCGGCAGG AACTTTCGCG ACGGTTCAAC CTGACGGCAG CTGTCGGTCC CCGGGAGTTG
GCCAAATTAC TCGAAGGCCA TTCAGACGAG GATATCCGGG AGGCTGAAAC GCTGCTGGCC
AACGCCAAGA TCGATGTGAA CGACTTCTTT GCATCCCGTA ATGGCAAGGC CGAGTTTGAG
GAGCTGCTTT CTTCGGCCTG TACGCCGGTT GAGTTCGGCA TTCAAAGTCT GCCCGAGGAT
GCCCCGGAGG AAGAGAGAAA CCGCCAGCTC GAGCCGGTTC TGGCTGAAAT TTCGGCGCAT
TCACCGCTGG AGCAAAGCCG TCTGCTGAAA CTGGTTCAGG AACGGCTGGG TAAAGCGGTT
CCAATGGCGA CCCTCAAGGA GCAGGTGCGC TCTGTTCAGC AGAACCGACG GGACAGCGCC
AAGAAGGAAA AGAAGAAAGC CAAACGTCTC AGCGGATCAC CGCCCGGTTC CTGTCGCGCC
CGGGTCGATG AGGTACTGAT TGATACAGAG CTGGAAAACG GTGCTCCGGA TTATACCGCT
GCAGCTGAAG CGGCCTATGA CTGGTTTACC GCCAACGGAG CCCAGTTCTT TCACACCCAG
ACCGGTGAGC CATTTATGTA TTTCGATAAC TCCATCTACT GGATGGATTC ACCCGACCGT
GGGCGCAAGA GACAGTATGC GGCCATGCTC TATAAGCACA CCGGCATGGT TCCGACATCC
AACGGCGGTC GCACCTTTTT CGAGGTATTG CCGAGTCTGG CGATGATTCG TGGTCAGGTG
CGAGACCATT TCTCGTGGCT GCATTCGGAT ATTTCCAATT TCACGGTCTA TTTTAACTTG
AATAATCAGG ACCATGAGAT TGCCCGGATC ACACCGGATG GCATCGAGAT TCTGAAGAAC
GGTGGAAATG CCGATGGGAT CATTCTCGAC GGCTCCCGCA AAATGAAGCC GCTGAAGTTT
CTGAAGGAAG CCTCTCCGGA GGAAGCCGAC AAACTGCTGG TCGATCTTCT GATCAACAAT
ATGACCTGCT CGCAGGGAGA CCGCTTTCTG ATTCTGTCCT GGCTGACCTG TTTTCTGCTG
ATCGACTTTT CCGGAACCCG GCCCATGACC CGTTTTGAAG GTTCGGCCGG TTCGGGTAAG
ACCACCGCCA GCAAGCTAAT TTCGGCGCTG CTTTACGGTG AGCCCCAGCA CAAGAAAGCC
ACCGATGCGG CCAACTATAC CGATGGTTCC CAGAATCCGC TTATCGTCCT CGACAACATC
GAGGTCAAGC AGATGACCGA GGATCTGACC ACCTTCATGC TGACCAGCAT CACCGGCATT
GCCAAAGAGA AACGCAAGAG CGGCACCGAC AGCGAAACCG TAACCGAGCG AACCAAATGT
CTGCTGAATA CCACCGGCAT CGAACCGTTG TGCGGAGAGC TGTCCGAAAT TCAGTCCCGT
AGCTTTGTGA TCAATTTTGA TATCGGTAAT CAGGGCAACG ACTGCTTCAT CGAGTCGGAG
GTGATTGCAG CTCTTCAGCG CAACCGGGAC CTGATCATTT CCGCTTTGAT GAAACGGACC
AGCGAGGTGC TGGCCATGAT GAAAGACGGG ATGCGGACAC AGGCGATGAA GCTGCTGCAC
GAGGCCCTTG GCAACCATGA CAAACGGCGC TGCAACGAAT ACCTCAGCCT GATGTATCTG
ATGCTGCTGG CCGGGTCATC TCAGGATCAG ATCGAACAGG GAATGTCGAC TCTGGCTCCA
GCCTTCAAGC AGCAGATCCA GACCATCAAC CAGACCAGTC GTGAAACGGC ACGGGATTCC
AATCACACCG CAACGGCGCT CTCGACTTTG TTCAAGGCAT GGCGAACAGC CGTGGAGGCC
GATCGGAAAG ACATGTACAA CGATCGCCGA GTGGATCACA TTCAGGAGTT CGTTGCCCGC
TATCAGGTGC AGCTTGAAGA AGACGGCTGC CTCAAGGAGG TATTGTCCCG GGAACTGTTC
GTGGCGCTCA AGCGTGTGGC CAGAGATTTT GGTCTGCGCT TTGAAATGGA TTCATCGAGG
CAGTTTGCCC AGCGCTTTGC CAACGATCTT GAAACCATCC GCGAGGCCGG ATTCGATGTG
GTCATCAGCC AGAAACGCTA CGGAACCAAG CTCTATACTA TCCAGACAGT CGAATGA
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| Protein sequence | MGGSDNVREY YRLITELDIG DVARDLLAGR ITQESRQRLQ CDCPHHQSQS RRSLHVMLDK
QGWYCFGCGV GGDVLQLVEF VQSGTVTAGQ SGPMPDSHRQ ARDFLAGKAG MPPLSRYGLT
QERLEQTEND RSFEIRVKDA LTELARYYHQ RLKENQEALT WLKEKYAISD ETIDDLLIGF
ADNESGVIAA LRSGEHGFSK RELSATGAFR PTSQDGLNPF FEKRIIFPYW SRGRVVFMIG
RKTPWTPDVN WEQGKYKKLP VHDEHQRPYV ARFINNAVLF NEDCLLGKPD HIIITEGVTD
CIALMQQGFP ALSPVTVRIR AADWERLVPK MRGLKTVYIC QDNEISEAGL KGALQTARTL
AEHKIDTKLV TIPLNEPQQQ ARQELSRRFN LTAAVGPREL AKLLEGHSDE DIREAETLLA
NAKIDVNDFF ASRNGKAEFE ELLSSACTPV EFGIQSLPED APEEERNRQL EPVLAEISAH
SPLEQSRLLK LVQERLGKAV PMATLKEQVR SVQQNRRDSA KKEKKKAKRL SGSPPGSCRA
RVDEVLIDTE LENGAPDYTA AAEAAYDWFT ANGAQFFHTQ TGEPFMYFDN SIYWMDSPDR
GRKRQYAAML YKHTGMVPTS NGGRTFFEVL PSLAMIRGQV RDHFSWLHSD ISNFTVYFNL
NNQDHEIARI TPDGIEILKN GGNADGIILD GSRKMKPLKF LKEASPEEAD KLLVDLLINN
MTCSQGDRFL ILSWLTCFLL IDFSGTRPMT RFEGSAGSGK TTASKLISAL LYGEPQHKKA
TDAANYTDGS QNPLIVLDNI EVKQMTEDLT TFMLTSITGI AKEKRKSGTD SETVTERTKC
LLNTTGIEPL CGELSEIQSR SFVINFDIGN QGNDCFIESE VIAALQRNRD LIISALMKRT
SEVLAMMKDG MRTQAMKLLH EALGNHDKRR CNEYLSLMYL MLLAGSSQDQ IEQGMSTLAP
AFKQQIQTIN QTSRETARDS NHTATALSTL FKAWRTAVEA DRKDMYNDRR VDHIQEFVAR
YQVQLEEDGC LKEVLSRELF VALKRVARDF GLRFEMDSSR QFAQRFANDL ETIREAGFDV
VISQKRYGTK LYTIQTVE
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