Gene Dde_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0849 
Symbol 
ID3755688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp879698 
End bp881803 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content58% 
IMG OID637781714 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_387345 
Protein GI78355896 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02916] putative PEP-CTERM system histidine kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.732792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGA TATTGTCAGT ATTTCTGGGA GCGCTGCTGG CTGCGGCTTT CTGCGTTTAC 
ACGGTGCGCA CTGCCGGTAT GCGCAGGGCG CTGACTGTCA TTCCCGCGGT GGGTGTGACA
GCAGCCGTGG CAGCGGCCGA AGGTGCCCTG CAGTATCTCA GTGTGCCTGC CCATGGTCTG
CTGCAACCGG TGCTGCTGCT GCAGGGGTTG TTATGTCCGG CGTGGCTGCT GTTCGGACTG
GCGTATGCAC GCGGTTTTTC GTGGCAGGGG CTCAGCCTGC TCAACCGCCT GTTGCTTTTC
GCTTCTTTTA TTCCCGCTTT GCTGGTGGTG CTGTTTCCGG TTTCCCGTTT TCTGTTTTTG
CCTGATTTTA CGCTGGAGCA GGTTATCTAT CTGGAGCCTT TGGCTTTTTC GTTGTATCTG
CTCATCATTT TGTTTCTTCT TGTGGCGTTG GGCAATCTGG AAGCCACACT GCGCAACGCG
CGGCACAGTG ACCGCTGGCG TGTGAAGCTG GCTTTGGTGG GCGGCGGTAC CGTGCTTATG
GCCCATGTCC TTTTTTACAG TCAGGGCCTG CTGCACCGTT CCATAGACAT GAACTACGGC
GGGCTGCGGA CGGCAGGCAG CATGCTGGGC ATAGCCATGC TGTTTTTTGC CGAGCTGCGG
CGCGAAAGCG GCAGGGTGAC GGTTACCGGC AGGTTTGCTT TGCGTTCCAC CGTGGTGCTG
CTGGCGGGCG TATACCTTAT AGGGCTGGGC ATTGCGCGTG AAGGAGTGCG GCATTTCGGC
TCGGAGTTCG AGCGGCACGC GGCTATCGGT CTTTTGTTTC TGCTGGGACT GGCGGTGGTG
CTGGTGCTGC TTTCCGAACG GGTGCGCAGA CGGCTGCGCA TATGGCTGCA GCGTAATTTT
TATCAGGACA AGTATGACTA CCGCAGCCAG TGGATGGAAT TTACAAGGCG TCTGGCCGGA
GTGCGCGGTA TGGACGAACT TACCCGCACG GTACTGCTGC ATTATTGCGA GGCCTTCGGT
TTTGTGGGCG GGGCGTGGTT TGCGGCGGAC CATGAAACAC AGGGCAGAGT GACGGCTGGT
GAGTACTACG AAATGGACGA GCCGCAAGTT ATGCCGGAGT CCATTGATTT TTCACTGATT
ATGGAACTGC AGGCTCCTGT GGCCATACCG GTGCTCAAAG ACCGGCTGGC TGCGGCAGGA
CGTATGGAGG AAGCAGGGTG TCTCGATTTT GTGCGTGCCA CCAGAGCCGA GGTTGTGGTG
CCTGTTGCGG CAGGAGACAG CTTTGAAGGG CTGCTGCTTC TCGGGCCGGC CATAGACCGT
TCGGAAGCCT ATGACACCGA AGATTTTGAG CTGATGGATG CCATGGCTCA CGAGGTGGGG
CTTACGGTGA AAAGTTTTCG TCTGGGCAAC GAGCTTGCGG CGGCGCGAGA GATGGAAGCC
ATGGGCAAAG TGGCTGCTTT TGTGCTGCAC GACCTGAAAA ATCAGGTTTA TACGTTGTCT
CTGGTAACGG AAAATGCCCG CGACTTCATC GGCGAACCTG ATTTTCAGGC CGATATGCTG
GAAAGTCTGG AAAACACCGT GACCAAGATG AAGGTGCTGA TAACGCAGCT GAAACACCTG
CCCGATGCCG GAAGCCTGCG TCTTGCGCCT GTGGATATGC ACGAACTGGT GCGTAAGGCG
GCTTTGCAGG TGCCCGGCGT CCGGCTGGTT GTGCAGGGGC CGCAGCTTGT TGCTGCCGTT
GATGAAGAGC AGATTGAAAA AGTGTTTGTG AATCTGTTTC TGAACGCGGT GGAAGCGGGC
GGTGACCGGC CGGTCACTGT AACTACGGTG CAGCAACCTG TATTTTCAGT TTCTGTGCGT
GACAGCGCCG GGGGCATAGA CAGAGACATT CTGCGCCGGG GGCTGTTCAA ACCGTTCCGC
AGTACCAAAA GACGCGGGAT GGGCATTGGT CTTTACCATT GCAAAAAAAT TGTCGAGGCG
CACGGCGCCG CGCTGCATGT GCGGAACAGG CCGGGAGAAG GGGCAGAATT TGTCATTGAA
TTCGCCCCGC AGCAGGAGAA GCCGCAGAGC GCGGGCAACG GCGGTGCAAA GGGCGCTTCT
GTCTGA
 
Protein sequence
MTLILSVFLG ALLAAAFCVY TVRTAGMRRA LTVIPAVGVT AAVAAAEGAL QYLSVPAHGL 
LQPVLLLQGL LCPAWLLFGL AYARGFSWQG LSLLNRLLLF ASFIPALLVV LFPVSRFLFL
PDFTLEQVIY LEPLAFSLYL LIILFLLVAL GNLEATLRNA RHSDRWRVKL ALVGGGTVLM
AHVLFYSQGL LHRSIDMNYG GLRTAGSMLG IAMLFFAELR RESGRVTVTG RFALRSTVVL
LAGVYLIGLG IAREGVRHFG SEFERHAAIG LLFLLGLAVV LVLLSERVRR RLRIWLQRNF
YQDKYDYRSQ WMEFTRRLAG VRGMDELTRT VLLHYCEAFG FVGGAWFAAD HETQGRVTAG
EYYEMDEPQV MPESIDFSLI MELQAPVAIP VLKDRLAAAG RMEEAGCLDF VRATRAEVVV
PVAAGDSFEG LLLLGPAIDR SEAYDTEDFE LMDAMAHEVG LTVKSFRLGN ELAAAREMEA
MGKVAAFVLH DLKNQVYTLS LVTENARDFI GEPDFQADML ESLENTVTKM KVLITQLKHL
PDAGSLRLAP VDMHELVRKA ALQVPGVRLV VQGPQLVAAV DEEQIEKVFV NLFLNAVEAG
GDRPVTVTTV QQPVFSVSVR DSAGGIDRDI LRRGLFKPFR STKRRGMGIG LYHCKKIVEA
HGAALHVRNR PGEGAEFVIE FAPQQEKPQS AGNGGAKGAS V