| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0413 |
|---|
| Symbol | |
|---|
| ID | 3756306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 409965 |
|---|
| End bp | 410687 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637781273 |
|---|
| Product | putative acyl-CoA thioesterase precursor |
|---|
| Protein accession | YP_386909 |
|---|
| Protein GI | 78355460 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGG TCCTTATGCG TCCGGCAATG TCCGGTTTGC GGTATCTGCC GGTGCTGCTG
TGCTGGTGTT TTGTGCTGGC CGCCGTAACG GCGGCCCCTG CTTCAGATGG TAAGCAGCCT
GCGCCGGCTG GCAACGGTTC TGCAGGGTCA GCAGCCAGAG TAACGTATAT TCTGGCATTA
GGCGACAGCC TGACTGCGGG ATACGGCCTC GAATCCGCGG ATAGCTTTCC CGCCGTGCTG
GAAAAAAGAC TGCGCGGGGC GGGCCTTTCT GTCCGGGTGA TCAACGCCGG TGTGTCAGGT
GATACCTCCG CAGGCGGGCT GGCGCGTCTC GGCTGGGCAA TGGACGCCGT GCCCGGCGGC
AGGCCGGATC TGGTCATTGT GGCGCTGGGG GCCAATGACG CGCTGCGGGG GCTTGATCCG
GCAATGATGC GTACCAACCT GGCCCGGATA CTGGAACAGT GTCTGGATGC AGGGGCGCGG
GTGTTGCTGG CAGGTATGCA GGCACCGCGC AATATGGGAA CAGATTATGC CGCACAGTTC
GATGCGGTGT ATCCGGAACT GGCGCAGCAG TATGATGTGC CGCTGTACCC TTTTTTTCTT
GAAGGCGTGG CTCTTGATCC TGCATTGAAC CAGCCGGACG GAATACATCC CGATGCGCAG
GGCGTGCAGG TGATTGTGGA AAAAATGCTG CCCCATGTGC TTTCAGCGCT GCGGGATTTA
TAG
|
|---|
| Protein sequence | MVEVLMRPAM SGLRYLPVLL CWCFVLAAVT AAPASDGKQP APAGNGSAGS AARVTYILAL
GDSLTAGYGL ESADSFPAVL EKRLRGAGLS VRVINAGVSG DTSAGGLARL GWAMDAVPGG
RPDLVIVALG ANDALRGLDP AMMRTNLARI LEQCLDAGAR VLLAGMQAPR NMGTDYAAQF
DAVYPELAQQ YDVPLYPFFL EGVALDPALN QPDGIHPDAQ GVQVIVEKML PHVLSALRDL
|
|---|
| |