| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0333 |
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| Symbol | |
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| ID | 3756382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 319856 |
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| End bp | 323119 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637781193 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_386829 |
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| Protein GI | 78355380 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.639877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGC GGACCGACCT CAAGCGTATT ATGGTCATCG GCTCGGGGCC TATTGTCATC
GGACAGGCCT GCGAATTCGA CTACTCCGGA ACTCAGGCCG TAAAGGCCCT CAAGGAAGAA
GGCTACGAGG TGGTGCTGGT CAACTCCAAC CCCGCCACCA TCATGACCGA TCCCGGTCTT
GCCGACCGGA CGTACATCGA ACCCATTGAA CCGGAAACCG TCGCCGCCAT CATCCGCAAA
GAGCGACCCT GTGCGCTGTT GCCCACTCTG GGCGGTCAGA CCGGCCTGAA CACGGCGCTT
GCCGTGGCCG AAACAGGCGT GCTGGAAGAG TGCGGCGTGG AACTGATAGG CGCCACCCGT
GACGTTATCA ACAAGGCGGA AAGCCGCGAT CTTTTCCGTC AGGCCATGGC CAACATAGGC
CTGAAAGTGC CCGCCAGCGG CATAGCCCGC ACCATGGACG ACGTGCGCAG GCTGGGCGCC
GAAATGCCCT TTCCGCTTAT TGTGCGGCCC GCATTTACTC TGGGCGGCAG CGGCGGCGGC
ATAGCCTACA ACATGGAAGA CCTTGAGGAA ATCGCTTCGC AGGGCCTTGC GGCCAGCATG
CAGAGCGAAA TCCTTGTGGA ACAGTCTGTG CTGGGCTGGA AAGAATATGA GATGGAAGTC
ATGCGCGACC GCAATGACAA CTGCGTCATC GTGTGCTCCA TCGAAAACAT CGATCCCATG
GGTGTGCACA CCGGCGACTC CATCACCGTG GCACCTGCCC AGACGCTGAC CGATGTCGAA
TACCAGATGA TGCGCGATGC CTCCATTGCC ATCATGCGTG AAATCGGCGT GGAAACCGGC
GGTTCCAACG TGCAGTTCGG CATCAACCCC GAAAACGGCG ACATGGTGGT CATCGAAATG
AACCCCCGTG TGTCGCGTTC TTCCGCACTG GCATCCAAAG CCACCGGCTT TCCCATAGCC
AAAATCGCGG CAAAGCTGGC AGTGGGCTAT ACGCTGGACG AAATTCCCAA CGATATCACC
CGCGAGACCA TGGCGTCGTT CGAGCCGTCC ATCGACTACT GCGTCATCAA GCTGCCGCGG
TTCACCTTTG AAAAATTCCC CGGTTCGCGC GACGAACTGA ACACCGCCAT GAAAAGCGTG
GGCGAAGCCA TGGCCATAGG CCGTACCTTC AAGGAAGCCC TGCAGAAAGG CCTGCGTTCG
CTCGAAGTGG GCGCTGCCGG TTTCGGGGGC AACTACCGCG AAGAGCTGCC CGCGCGTGAA
GACATCATGC CGCGGCTGCG CACGCCCAAC TCCAGACGCA TATTCTGGCT GCGTCTGGCC
ATGCTGGCCG GATTCACGCT GGAAGAGCTG TATGAAATCA CGGCCATCGA CCCCTGGTTT
CTGCGGCAGT TCAAAGATGT GCTGGACATG GAAGCGGCCC TCAAGGGATT TGCGCTGGCA
AACTCCATGG TGGCGGAGAA CCCCGACCTT GTGTCGCTGA TGAAGCGGGC CAAGGAATAC
GGTTTTTCCG ACAGACAGCT TGCCGAAATG TGGAAGCTGC CCGAATCCGC CGTGCGCGAC
CTGCGCAAGT CCATGGGCAT CCGGCCCACC TATTATCTGG TGGATACCTG CGCGGCCGAG
TTTGAAGCCT ATACGCCGTA TTATTACTCC ACATACGAAA CAGGCAGAGA GCTTGTGGCC
GAAGACCGTA AAAAGGTCAT CATCTTCGGC GGCGGACCCA ACCGCATCGG GCAGGGCATC
GAGTTTGACT ACTGCTGCTG TCATGCATCG TTCGCTCTGC GCGATATGAA CGTGCAGTCC
ATCATGGTCA ACTCCAACCC CGAAACCGTC TCCACCGACT ACGACACCTC GGACAGGCTG
TATTTCGAGC CGCTGACCTT TGAGGATGTC ATGAACATTG TGGAAGCTGA AAAGCCGGAC
GGTGTCATAG TGCAGTTCGG CGGGCAGACA CCGCTGAACC TCGCCGTGCC GCTCATGCGC
GCCGGTGTGC CCATTCTGGG GACACATCCC GATTCCATCG ACCGTGCCGA AGACCGCGAG
CGTTTTCAGG CGCTCATTCA GAAGCTGGAT CTGCTGCAGC CTGCCAACGA CACCGTGATG
TCGCTGGAAG AAGCTCTGAA AGCCAGCGAG ACCATCGGAT ACCCCGTGGT TGTGCGCCCC
AGCTACGTGC TGGGCGGACG TGCCATGGAA GTGGTTTACG ATGCGGAACA GCTGCGGACG
TACTTTGCCA ACTCGGTGGG CAAAGCTCCG GAGCATCCCA TACTTATCGA TAAGTTTCTT
GAAAACGCCA CAGAGGTTGA CGTGGACGCC CTTTCCGACG GGTGCGATAC CTACGTTGCC
GGCATTATGG AACATATCGA AGAGGCGGGC ATTCATTCCG GCGATTCTGC CTGTGTGATT
CCGCCCCACA CGCTGCCTGC TGATATTGTG GAAGAAATCC GCCGTCAGAC CGTTGCGCTG
GCAACAGAGC TGAAGGTGGT GGGACTCATG AACATTCAGT TCGCCATCAA GGACGGACGC
GTGTTCATCC TTGAGGTCAA CCCCCGCGCT TCGCGCACCG CGCCTTTTGT TTCAAAGGCC
ACGGGCGTGC CGCTGCCCCG TCTGGCAACA CAGGTGATGA TGGGAACGCC GCTGCGCGAA
CTCGACCCGT GGAGCATGCG CCGCAGAGGC TACTTCTCCG TTAAGGAATC CGTCTTCCCG
TTCAAGCGCT TCCCGGGTGT CGATATTCTG CTTGGCCCCG AAATGCGTTC CACGGGCGAG
GTGATGGGCA TGGGCCGCAC CTTTGAGGAA GCCTTTATGA AGGGGCAGAT CGCCGGCGGA
CAGAAACTGC CGCAGGAAGG CAAGGTCTTC ATTTCCGTCA ACGACAAGGA CAAACCCTAC
GTTGTGGAAG TGGCGCGTGT GTTCGCCGGT CTGGGGTTTG AGGTGCTGGC CACCAAAGGC
ACATGCAAGC TGCTGGAAGA AAACAATGTT TCATGCACGC CTGTGTACAA GGTGTACGAG
GGCAGACCCA ACATTGTGGA CTTCATAAAG AACGGCGAGG TTTCGCTGGT GGTGAACACC
GCCTCCGGAA AGCGTACTGT TCAGGATTCC AAGGACATCC GGCAGGCGAC GCTGCTGTAC
GGGGTACCCT ACAGCACCAC GGTATCCGGT GCGCACGCCA TCGCGCGGGC CATTGCCGAG
CAGCGCCGCT GCGGGCTTAC CGTGAAAAGC CTGCAGGAAT ACTACGCGGG CAGCACCGAA
GCGCCCGTAT GCGGGGAAAA ATAA
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| Protein sequence | MPKRTDLKRI MVIGSGPIVI GQACEFDYSG TQAVKALKEE GYEVVLVNSN PATIMTDPGL
ADRTYIEPIE PETVAAIIRK ERPCALLPTL GGQTGLNTAL AVAETGVLEE CGVELIGATR
DVINKAESRD LFRQAMANIG LKVPASGIAR TMDDVRRLGA EMPFPLIVRP AFTLGGSGGG
IAYNMEDLEE IASQGLAASM QSEILVEQSV LGWKEYEMEV MRDRNDNCVI VCSIENIDPM
GVHTGDSITV APAQTLTDVE YQMMRDASIA IMREIGVETG GSNVQFGINP ENGDMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIPNDIT RETMASFEPS IDYCVIKLPR
FTFEKFPGSR DELNTAMKSV GEAMAIGRTF KEALQKGLRS LEVGAAGFGG NYREELPARE
DIMPRLRTPN SRRIFWLRLA MLAGFTLEEL YEITAIDPWF LRQFKDVLDM EAALKGFALA
NSMVAENPDL VSLMKRAKEY GFSDRQLAEM WKLPESAVRD LRKSMGIRPT YYLVDTCAAE
FEAYTPYYYS TYETGRELVA EDRKKVIIFG GGPNRIGQGI EFDYCCCHAS FALRDMNVQS
IMVNSNPETV STDYDTSDRL YFEPLTFEDV MNIVEAEKPD GVIVQFGGQT PLNLAVPLMR
AGVPILGTHP DSIDRAEDRE RFQALIQKLD LLQPANDTVM SLEEALKASE TIGYPVVVRP
SYVLGGRAME VVYDAEQLRT YFANSVGKAP EHPILIDKFL ENATEVDVDA LSDGCDTYVA
GIMEHIEEAG IHSGDSACVI PPHTLPADIV EEIRRQTVAL ATELKVVGLM NIQFAIKDGR
VFILEVNPRA SRTAPFVSKA TGVPLPRLAT QVMMGTPLRE LDPWSMRRRG YFSVKESVFP
FKRFPGVDIL LGPEMRSTGE VMGMGRTFEE AFMKGQIAGG QKLPQEGKVF ISVNDKDKPY
VVEVARVFAG LGFEVLATKG TCKLLEENNV SCTPVYKVYE GRPNIVDFIK NGEVSLVVNT
ASGKRTVQDS KDIRQATLLY GVPYSTTVSG AHAIARAIAE QRRCGLTVKS LQEYYAGSTE
APVCGEK
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