Gene Dde_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0285 
Symbol 
ID3755106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp274528 
End bp275628 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content64% 
IMG OID637781145 
ProductABC-type uncharacterized transport system permease component-like 
Protein accessionYP_386781 
Protein GI78355332 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0371568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTGA AAAGAGTGTT TCCGGCGGTG GTTGCCGTAT GTCTGCTGGC ATGTGCCGCC 
CATGCGTCGC CGTTTACAGG CAGCGGGGGC AATGCCCGCG GTCCCGCTTC CGAAAGCGGT 
TTTTTTGCGC TGGAGCCGCC CGCGGGGCAG GTTTCCGGCG CGGACGGTCA GCATGCCGCA 
CCAAAAGAAG CGCGGGATGC GGCTGAGCGC GGGACCGGCG GCGGATTTAC CGGCGGCAGG 
GGGCATCAGC ACGCGCCCGC GGCCGTTTCC GGTGCGGATG CCGGACAGGG CGTAGAGCCT 
TTTTTCACTC CGCCGCCCCT TTATAACCGC ATCATCAGTC TGTCCACCAG AGCGCAGCAT 
TATTTGCGGG GGCAGATGGT TTCCTTTGCC TCGGGCATCA AGGAGTCACC TTACGGTACT 
TCCTTCTGGC TGTTTCTGGC CGTGTCATTT GTGTACGGCG TGGTGCACGC CATAGGGCCG 
GGACACGGCA AGGCCGTGGT CTTCTGCTAT TTTCTGGGGC GTTCGGGCGG AATATCCCGG 
GGGCTGCTTA TGGGCAACCT GCTGACATCT GTTCATGTGC TGTCGGCGGC GGTGCTGGTT 
TTTGCCGCGC ATCTGCTGTT CGAGCAGGGC GCCGCCCGCG GTATCCACGG TGTGAGCGGT 
CCCGTGCAGC GTTTCAGCTA CGGCATCATC ATGCTGGTGG GCGCCGCCAT GCTGCTGCAT 
GCACTGTACG AGCTTTTCAG CGGCAGGCTG GGCGGACGGG TGCGGCAGGC CACGGCGGAA 
TGTCCTGCAG GTTATGGCAG TCTGACTGCC GTTTCCGTAC TGGCCGGACT GGTGCCCTGC 
CCGGCAGCGG TGCTTATACT TACCTTTGCG CGGGGGCTGG ACATCACACA GGCGGGAGTG 
CTGGCGCTGG TGGCGCTGGC GCTGGGCATG GGGCTGACCA CATCGGCGTT CGGCCTGCTG 
AGCATGGTTT CGCGCAGGGT GCTGCTGCAC AGCACGGGGC GCAGCACACG GGCCGTTGTG 
GCCGGTTATG CGCTGCTTTC CGTCACGGGG GCGCTGGCTG TGACGCTGCT GGGCTTTATC 
ATGTATACCG GCAGCGTCTG A
 
Protein sequence
MVLKRVFPAV VAVCLLACAA HASPFTGSGG NARGPASESG FFALEPPAGQ VSGADGQHAA 
PKEARDAAER GTGGGFTGGR GHQHAPAAVS GADAGQGVEP FFTPPPLYNR IISLSTRAQH 
YLRGQMVSFA SGIKESPYGT SFWLFLAVSF VYGVVHAIGP GHGKAVVFCY FLGRSGGISR 
GLLMGNLLTS VHVLSAAVLV FAAHLLFEQG AARGIHGVSG PVQRFSYGII MLVGAAMLLH 
ALYELFSGRL GGRVRQATAE CPAGYGSLTA VSVLAGLVPC PAAVLILTFA RGLDITQAGV 
LALVALALGM GLTTSAFGLL SMVSRRVLLH STGRSTRAVV AGYALLSVTG ALAVTLLGFI 
MYTGSV