Gene Dde_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0284 
Symbol 
ID3755105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp273935 
End bp274528 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content54% 
IMG OID637781144 
ProductABC-type uncharacterized transport system periplasmic component-like 
Protein accessionYP_386780 
Protein GI78355331 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0329928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGAAGGTTAA CATACAGCTG CTGTGGTTTA TAGCTGTCTG CTGTGCGGCA 
TTTGTACCGC AGCAGGCGGC TGCGCATCCG CATGTGTTTG TGGAGGCGCT GGTACAGCTG 
GAGATTGAAA ACGGCCGCCT GAAGGCTCTG CACGAGACGT GGAGCTTTGA CGAGATGTCC 
AGTGCCTTGT TTCTGGGCGA TCTTGATTTG AATCAGGACG GTGCGCTGAC GCCTGATGAA 
TGGGAAAAAC TGAAGGCGGA CATTACCGGC TACCTGCACG AGGAAGGCTT TTACACGCAC 
ATTTATGCGG GCGGAAAGAC CGCCGGTGTC ACACGGGTGG AGCATTTCAC CGCCACGTTC 
AGCGACGGCA TGCTGCGGTA TTCCTTCACG GTGCCGCTCG ATCTGCCTGC GGCTGCAGGA 
GAAGTGGTCA AAGTGGCCTT GTACGACCCT ACCTATTACA CGGCCTTTTT CTTTGATGAA 
CGGCATGTGA CGGTGAAGGG TGCGGACAAA GCAAGGGTGG TGCTGCAGGA AGCTCCTGAA 
CTTGCATATT ATTACGGGCA GATAGTGCCC TATGCCATAG AGCTGGAGTT GTAA
 
Protein sequence
MKRMKVNIQL LWFIAVCCAA FVPQQAAAHP HVFVEALVQL EIENGRLKAL HETWSFDEMS 
SALFLGDLDL NQDGALTPDE WEKLKADITG YLHEEGFYTH IYAGGKTAGV TRVEHFTATF 
SDGMLRYSFT VPLDLPAAAG EVVKVALYDP TYYTAFFFDE RHVTVKGADK ARVVLQEAPE 
LAYYYGQIVP YAIELEL