Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0240 |
Symbol | fumC |
ID | 3755100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 224976 |
End bp | 226376 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637781100 |
Product | fumarate hydratase |
Protein accession | YP_386736 |
Protein GI | 161485611 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCAG CCACCCGTAC GGAACATGAC AGCATGGGCG CAGTGGAAGT GCCCGCCGAC CGCTACTGGG GCGCGCAGAC GCAGCGCTCG CTCAAATATT TCGCCATCGG GCAGGACACC ATGCCCGAAG AAATCATCCG CGCTTTCGGG CTGCTGAAAA AGGCTGCCGC CATTGCCAAC CGTGATCTGG GCAGACTGGA CCCGGAACTG TGCGGTTTCA TATGCGCCGC AGCGGATGAA GTAGCCGACG GAAAACTTTC CGGTCACTTT CCGCTCAAGG TCTGGCAGAC GGGCAGCGGC ACGCAGACCA ACATGAATGT GAACGAGGTC ATCGCCAACC GTGCCATTGA GCTGAGCGGA GGCATTCCCG GTTCCAAATC TCCCGTGCAC CCCAATGATC ATGTGAACAT GTCACAATCA TCCAACGACA CATTTCCTGC GGCCATGCAC ATAGCCGCAG CCACAGCCCT TTCCCGCGAA CTGGTGCCTG CGGTGCGCAC GCTGCGCAAC GCGCTGGCAC AAAAAAGCCA CGACTGGCAG TCGGTGGTCA AGCTGGGCCG CACACATCTG CAGGATGCCG TGCCCATGAC GCTGGGGCAG GAATTTTCCG GATACACAGC TCTTCTTGAT GACGGACTGG AAAGAATGGA AGCGGTGATG CCCCATCTGC TGCGGCTGGC GCTGGGCGGC ACGGCAGTGG GGACGGGTCT TAACGCTCCG CGTGGTTTTG CGGGCATGGC TGCCGCGGGT GTTGCGCGCT TCACGGGTCT GCCTTTTGTA CCGGCACCCA ATTTTTTTGC CGTGCTTTCA GCCCACGATG CCGTGTGCAT GGCCAGCGGA GCGCTGCGCA CCCTTGCCGG TTCACTGATG AAAATAGCCA ACGACATCCG CTGGCTGGCA TCGGGGCCGC GTTGCGGCAT CGGCGAACTC AGACTGCCCG CCAACGAACC CGGATCGTCC ATCATGCCCG GCAAGGTCAA CCCCACGCAG TGCGAAGCTC TGACCATGGT GGCCGTGCAG GTGATGGGGC TGGACGCCGC CACCGGCATA GCCGGTTCGC AGGGCAATTT CGAGCTGAAC GTCTTCAAGC CGCTGATGAT TTTCAATCTG CTGACATCCG TGCGCCTGCT GACAGACGGC TGCCGTTCAT TCACCGCCCA TGCAGTGGAA GGCATGCAGC CTGACATGCA GCGTATCAGC GACCATCTGG GCAGATCGCT CATGCTTGTG ACTGCGTTGT CGCCCGTCAT CGGCTACGAC AATGCCGCCA GAGCGGCGCA CCACGCACAT GCGCGGGGCA CAACGCTCAA AGAGGCCTGT CTGGAACTGG AACTTATTTC GGCAGAAGAA TTTGACGCTG CCGTGGACCC CATGGTCATG GCAGTTCCCC ATGGCGCATG A
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Protein sequence | MPPATRTEHD SMGAVEVPAD RYWGAQTQRS LKYFAIGQDT MPEEIIRAFG LLKKAAAIAN RDLGRLDPEL CGFICAAADE VADGKLSGHF PLKVWQTGSG TQTNMNVNEV IANRAIELSG GIPGSKSPVH PNDHVNMSQS SNDTFPAAMH IAAATALSRE LVPAVRTLRN ALAQKSHDWQ SVVKLGRTHL QDAVPMTLGQ EFSGYTALLD DGLERMEAVM PHLLRLALGG TAVGTGLNAP RGFAGMAAAG VARFTGLPFV PAPNFFAVLS AHDAVCMASG ALRTLAGSLM KIANDIRWLA SGPRCGIGEL RLPANEPGSS IMPGKVNPTQ CEALTMVAVQ VMGLDAATGI AGSQGNFELN VFKPLMIFNL LTSVRLLTDG CRSFTAHAVE GMQPDMQRIS DHLGRSLMLV TALSPVIGYD NAARAAHHAH ARGTTLKEAC LELELISAEE FDAAVDPMVM AVPHGA
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