| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0120 |
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| Symbol | |
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| ID | 3756438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 111622 |
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| End bp | 112620 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780978 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_386616 |
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| Protein GI | 78355167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC CGGCAACAGG CGGGGTACGC CACATAGAGG TCACCCGGGC AGAGGCAGGG
CAAAAGCTTC TGCAGTTTCT GCAACGCAGA CTGGGCTCCG GTGTGCCGCA GCAGTTTCTG
ATGCGCATCA TCCGCAAGGG TGAAGTCCGT GTAAACAAAG GCCGCGCAAA ACCTTATGAC
AGAGTGTCAG AGGGCGACGT GGTCCGCATA CCGCCGGTGC GGCCCGCCGC AGAGCCTTCC
TGCGATGCGG CTTGCGCCGT TCCTGCGGTC TCTGCGTCGC CGCTGCCGCA AATCATCGCC
AGCGGCGACG GTCTGCTGGT CATCAACAAA CCCGCAGGCC TGCCCGTACA ACCGGGCACC
GGACACACAG ACTGTGTCAC CGCCCGTCTG GCGGCACACT TTGCCGGCGC CGACTTCATG
CCTGCACCGG CCCACAGGCT GGACAAAAAC ACCTCGGGGC TGCTGCTGGC CGGCACAACC
TATACGGCCC TGCGCACCCT GCAGGACCTT TTCCGCAACG GGCACAGCCT GATAAAGGAT
TATTGTGCGT GGGTGTGCGG TATCTGGCCG GAGCAGGAGG CGCTGACGCT GACAGATGTA
CTGGTGAAAG AAGGAACGCC GGGAAAGGAA AAAATACACG CACTGCCCGC CGGCAGCGCG
CAGCCGCATA CGGCTCCGCC GAAGGGCAGA GAAGCTCTCT GTCAGGTGGT GCCGCTGCTG
CGCCTCGACA ACGCCACCCT GCTGGGCATA CGGCTTGCCA CCGGACGCAC ACACCAGATA
CGGGTACAGC TGGCCTCACG GAACCATCCC GTCATCGGCG ATGTGAAGTA TGGTGCTCCC
GCATGCAGAG CGGGGATGCT GCTGCACGCC TTCCGGCTGG TTCTGCCCGC CCCCTTCGGG
CGTGAGTTCT TCTGCCCGCC GCCATGGCAG GGCCGCCGGG CTGTTGCCCC GCAGACTCTC
CGGCAGTGCC GGTTTCCGCC GCTGCGGCCC GCAGACTGA
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| Protein sequence | MTAPATGGVR HIEVTRAEAG QKLLQFLQRR LGSGVPQQFL MRIIRKGEVR VNKGRAKPYD
RVSEGDVVRI PPVRPAAEPS CDAACAVPAV SASPLPQIIA SGDGLLVINK PAGLPVQPGT
GHTDCVTARL AAHFAGADFM PAPAHRLDKN TSGLLLAGTT YTALRTLQDL FRNGHSLIKD
YCAWVCGIWP EQEALTLTDV LVKEGTPGKE KIHALPAGSA QPHTAPPKGR EALCQVVPLL
RLDNATLLGI RLATGRTHQI RVQLASRNHP VIGDVKYGAP ACRAGMLLHA FRLVLPAPFG
REFFCPPPWQ GRRAVAPQTL RQCRFPPLRP AD
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