Gene Dd703_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_4008 
Symbol 
ID8087398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4647453 
End bp4648790 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content56% 
IMG OID644838103 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_002989582 
Protein GI242241401 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT CGCAGACGGG CTCTGCCGTT GGGGTAGGGC TGTTGGAGCG CATGTTCAAA 
TTGCAACAAC ACGGCACTAC GGCACGCACG GAAATCATTG CGGGGTTTAC TACCTTTTTG
ACAATGGTCT ACATCGTATT TGTTAACCCG CAAATTCTGG GCGTGGCCGG TATGGACACG
CAAGCCGTGT TTGTCACTAC CTGCCTGATT GCTGCATTTG GCAGTATTTT CATGGGGATG
CTGGCTAACC TTCCGGTCGC GTTGGCGCCG GCGATGGGGC TGAACGCTTT CTTTGCGTTT
GTGGTGGTCG GTACGATGGG GCTGCCGTGG CAGGTGGCGA TGGGCGCTGT GTTCTGGGGG
GCGATCGGTT TCCTGTTGCT GACGATTTTC CAGGTGCGTT ACTGGATGGT AGCCAATATC
CCGCAGAGCC TGCGTCTGGG GATCGCCAGC GGTATCGGTC TGTTTATTGC GATGATCGGC
CTGAAAAATG CCGGCATTAT CGTTCCTAAT CCGGAAACCA TTGTGGCGGT GGGGAAACTG
ATGTCTCATC GCGTATTGCT GGGTGTGTTG GGTTTTTTCA TCATTGTGGT GTTGGCGTCC
CGTAATATTC ATGCAGCCGT ACTGATCTCC ATTGCCGTTA CCACCATGCT GGGTCTGGCG
CTGGGCGATG TGAACTATAC CGGGATCTTC TCGGTACCAC CGAGCGTCAA CAACGTGGTG
GGTCAGGTGG ATTTGGCGGG CTCTCTAAAT CTGGGGCTGT CCGGTGTGAT TTTTTCCTTC
ATGCTGGTTA ATTTGTTCGA TTCCTCCGGT ACGTTGATCG GCGTCACCGA TAAAGCGGGT
CTTACTGACG CTCGCGGCAA ATTCCCGAAC ATGAAGCGGG CGCTGTATGT CGACAGCATC
AGCTCTGTCG TTGGCGCTTT CATCGGCACC TCTTCCGTTA CAGCCTATGT CGAAAGTTCG
TCCGGCGTGT CCATCGGCGG GCGCACCGGC CTGACCGCAG TCGTCGTCGG GCTGCTGTTT
TTGCTGGTGA TGTTCCTGTC GCCGCTGGCG GGAATGGTTC CGGCTTATGC CGCCGCCGGC
GCGTTAATCT ATGTGGGGGT GCTGATGACG TCCAGCCTGG CGCGTGTGCG TTGGGACGAT
CTGACCGACG CCGTACCGGC GTTTGTAACC GCCGTTATGA TGCCGTTCAG CTTTTCCATT
ACCGAAGGGA TTGCGCTGGG CTTTATCTCT TATGCGGTAA TGAAGGCGGC AACCGGACGC
TGGCGTGAAA TCAGCCCGTG CGTCATGGTG GTCGCCGCAT TATTCCTGCT GAAAATCGTT
TTTATCGACG CGCACTGA
 
Protein sequence
MDKSQTGSAV GVGLLERMFK LQQHGTTART EIIAGFTTFL TMVYIVFVNP QILGVAGMDT 
QAVFVTTCLI AAFGSIFMGM LANLPVALAP AMGLNAFFAF VVVGTMGLPW QVAMGAVFWG
AIGFLLLTIF QVRYWMVANI PQSLRLGIAS GIGLFIAMIG LKNAGIIVPN PETIVAVGKL
MSHRVLLGVL GFFIIVVLAS RNIHAAVLIS IAVTTMLGLA LGDVNYTGIF SVPPSVNNVV
GQVDLAGSLN LGLSGVIFSF MLVNLFDSSG TLIGVTDKAG LTDARGKFPN MKRALYVDSI
SSVVGAFIGT SSVTAYVESS SGVSIGGRTG LTAVVVGLLF LLVMFLSPLA GMVPAYAAAG
ALIYVGVLMT SSLARVRWDD LTDAVPAFVT AVMMPFSFSI TEGIALGFIS YAVMKAATGR
WREISPCVMV VAALFLLKIV FIDAH