Gene Dd703_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3905 
Symbol 
ID8087290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4524537 
End bp4525436 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID644837996 
Productdipeptide transporter 
Protein accessionYP_002989480 
Protein GI242241299 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG TTACAGAGCC GGTGGCCAAT GCCCCGGCGC CGATGACCCC GTTGCAGGAA 
TTCTGGCACT ACTTTAAACG CAACAAAGGC GCGGTAGTCG GTCTGGTTTA TGTGGCGATC
ATGCTGGTTT TAGCGCTGGG CGCCGGCGTG CTGGCGCCGC ATTCGCCGGC CGAGCAGTTT
CGTGAAGCGT TGCTGCACCC GCCGGTATGG CAGGACGGCG GCAGCTGGCA GTTTCTTCTG
GGAACCGACG ATGTCGGCCG CGATATTCTG TCGCGCCTGA TGTACGGCGC GCGCCTGTCG
CTGTTGGTCG GCTGCCTGGT GGTGGTGATG TCGTTGATCC TCGGCATCGT CTTCGGGCTG
GTGGCCGGTT ACTTCGGCGG CGCCGTTGAC GCGGCCATTA TGCGTCTGGT GGATATCATG
CTGGCGTTGC CCAGCCTGTT GCTGGCGCTG GTGCTGGTGG CGATTTTCGG GCCGTCCATC
GTCAATGCTT CGCTGGCGTT GACCTTCGTC TCTTTACCGC ATTATGTGCG CCTGACGCGC
GCGGCGGTGC TGGTGGAAGT CAATCGCGAT TATGTGGTGG CATCCCGTGT GGCGGGCGCC
GGCGCATTGC GCCAGATGTT CGTCAACATT TTCCCCAACT GCCTGGCGCC GCTGATCGTG
CAGGCATCAA TGGGCTTTTC CAACGCCATT CTCGACATGG CTGCGCTTGG GTTCCTCGGT
ATGGGCGCAC AGCCGCCGAC GCCGGAGTGG GGCACCATGC TGTCCGACGT GCTGCAGTTT
GCGCAGAGCG CCTGGTGGGT GGTGACGTTC CCCGGCCTTG CCATTCTGCT GACAGTATTG
GCATTCAACC TGATGGGGGA TGGCTTGCGT GATGCCCTCG ACCCCAAACT CAAGCAGTAA
 
Protein sequence
MSQVTEPVAN APAPMTPLQE FWHYFKRNKG AVVGLVYVAI MLVLALGAGV LAPHSPAEQF 
REALLHPPVW QDGGSWQFLL GTDDVGRDIL SRLMYGARLS LLVGCLVVVM SLILGIVFGL
VAGYFGGAVD AAIMRLVDIM LALPSLLLAL VLVAIFGPSI VNASLALTFV SLPHYVRLTR
AAVLVEVNRD YVVASRVAGA GALRQMFVNI FPNCLAPLIV QASMGFSNAI LDMAALGFLG
MGAQPPTPEW GTMLSDVLQF AQSAWWVVTF PGLAILLTVL AFNLMGDGLR DALDPKLKQ