Gene Dd703_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3726 
Symbol 
ID8087096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4315657 
End bp4317096 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content56% 
IMG OID644837804 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_002989303 
Protein GI242241122 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCGCT ATCAACATCT GGCAACGCTG CTAGCCCAGC GTATCGAACA AGGGCTGTAT 
CAGGGCGGGG AGCGGCTGCC GTCGGTACGG GCGCTCAGCC AGGAACATGG CGTCAGCATC
AGTACCGTGC AACAGGCCTA CTACCTGCTG GAGCAGCAGC AATTGATCGT GCCGTATCCT
CGCTCCGGTT ATTTTGTGCG TACCCGCAAA GCGTCGCCGC CCATTCCGGC GATGTCGCGG
CCGGTACAGC GTCCGGTTGA GGTGAAAAAA TGGGGGGCGG TACTGGAGTT GGTACAGGCC
CGGCAGGATC CCAATCTGAT TTCTTTAGGA AGCAGCCAGC CGGATTTGAC GCAGAACACG
CTGAAACCAT TATGGAAACA GTTGCAGCGC GTGGGGCAGC GGCAGGATCC GTCCTCGTTC
ATGTATGACC AGCTGGCGGG AACGCCGCTG TTACGCGAAC AGATCGCCCG ATTAATGGTG
GACAGCGGTT GCCAGCTGTC GGCGGAAGAT ATTGTCGTGA CCAGCGGCGC GACGGAGGCG
CTGGCGGTGG CGATTCGCGC GGTGGCGAAC CCAGGGGATA TCGTTGCCGT CGAGTCCCCT
GTTTTTCACG GTATTTTGCA AATACTGTGT GGTTTGGATA TCAAAGTCAT TGAGATTCCT
ACCGATTTCA CCAATGGCAT TAGCCTGGAA GCACTGGAAC TGGTTCTGGA ACAGTGGCCG
ATTAAAGCGG TGCTGGTGGT GCCGCATTGC AATAACCCGC TGGGTTTTAT TATGCCGCCG
CACCGTAAAC GGGCGCTGAT GACGCTGGCA CAGCGTTATG ACATCGCCAT CATTGAAGAC
GATGTGTATG GCGAATTGGC CTACGAATAC CCGCGGCCGA CCACCCTAAA ATCGATGGAT
ATCGATGGCC GGGTTTTGTT GTGCAGCTCG TTTTCGAAAA CACTGGCGCC GGGGCTGAGG
GTCGGTTGGG TGGTATCCGG GCGCTATTTT GATCGCGTTA TGCACGCCAA ATACACCAAT
ACCGGCACCA CGGCCATCTG TACGCAACTG GCGATCGCCG AGTTTATTCG TCAGGGGTAT
TACCAGCCGC ATGTGCGCCG GATGCGCAGT CTTTATCAGC GTAATCTGGA AACGTTCGCG
TGTTGGCTCC GTTACTACTT TCCGGAAGAG ATTTGCGTGA GCAGGCCGCA AGGGGGATTT
GTGCTATGGG TGGAAATGCC GGAGTACATG GACGGCGTAC AGCTACGTGA ACATTTGCGA
GCCACGGCCA ATATCCACAT CGCTGAAGGC TCGCTGTTTT CTGCGTCGGG CAAATATCGC
CACTGCCTGC GCATGAGTTG TTCGCAACCC TGGAGCAACG ACATGGAGAA AACGATAGCG
ACTATCGGCG CAGCGATCAA AGGCATGTTA CTGACGTATC AGAAAAATGT TCCCGTCTGA
 
Protein sequence
MTRYQHLATL LAQRIEQGLY QGGERLPSVR ALSQEHGVSI STVQQAYYLL EQQQLIVPYP 
RSGYFVRTRK ASPPIPAMSR PVQRPVEVKK WGAVLELVQA RQDPNLISLG SSQPDLTQNT
LKPLWKQLQR VGQRQDPSSF MYDQLAGTPL LREQIARLMV DSGCQLSAED IVVTSGATEA
LAVAIRAVAN PGDIVAVESP VFHGILQILC GLDIKVIEIP TDFTNGISLE ALELVLEQWP
IKAVLVVPHC NNPLGFIMPP HRKRALMTLA QRYDIAIIED DVYGELAYEY PRPTTLKSMD
IDGRVLLCSS FSKTLAPGLR VGWVVSGRYF DRVMHAKYTN TGTTAICTQL AIAEFIRQGY
YQPHVRRMRS LYQRNLETFA CWLRYYFPEE ICVSRPQGGF VLWVEMPEYM DGVQLREHLR
ATANIHIAEG SLFSASGKYR HCLRMSCSQP WSNDMEKTIA TIGAAIKGML LTYQKNVPV