| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3668 |
|---|
| Symbol | |
|---|
| ID | 8087034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 4251092 |
|---|
| End bp | 4252039 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644837744 |
|---|
| Product | p-hydroxybenzoic acid efflux subunit AaeA |
|---|
| Protein accession | YP_002989247 |
|---|
| Protein GI | 242241066 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCT CTGTTTTAAA CATCATCACA AAAAAACTGA GCCGTGTTGC GATGACGCTC
ATTGTGGTGG CGGCGGCCGC TGTGGCGTTG GTCAAAGTCT GGTCGTTCTA TACCGAATCC
CCCTGGACTC GTGACGCTAA ATTTACCGCC GACGTGGTGG CGATTGCGCC GGACGTCAGC
GGGTTGTTGA CGTCGGTGCG TGTGCAGGAT AACCAACCGG TACAACAGGG CGACGTGCTG
TTTGTCGTCG ATCAACCGCG CTACCAGCAG GCGCTGGAAG AGGCGCAGGC GGATGTCTCC
TACTATCAGG CGCTGGCGGA AGAGAAAAAA CGCGAATCGA CCCGGCGTTT ACGGTTGGGC
GTACAGGTGA TGTCGCGCGA AGAGATCGAA CAGTCCGGCA ATGCGCTGCA AACCACCCAA
CATCAGTTGG CCAAAGCCCA GGCGCAACTG GCGCTGGCTA AACTGGATTT GGAACGCACC
GTGGTGCGGG CGCCGGCGGA TGGCTGGATT ACCAACCTGA ATGTACACTC CGGCGAATTC
ATCACCCGTG GTACGACAGC GGTGGCGCTG GTGAAAAAGG ATTCCTTCTA CCTGCTGGCT
TATATGGAAG AGACCAAACT GGCCGGGATC CGGCCCGGCA GCCAGGTGGA AATTACGCCG
CTCGGCAGCA ACCAGATTCT GCGCGGTACG GTGGACAGCA TCTCCGCCGG GATCGCCAAT
AGCAGCAGCA CGGTGGGCAG CAAAGGGCTG GCGACGGTCG ATGCCAGTCT GGAATGGGTG
CGTCTGGCGC AGCGGGTACC GGTAAAAATC CGTCTGACGC AGCAGTGGGG TGATCGTTAC
CCGGCGGGAA CCACCGCCAC CGTTCTGGTG ACGGGCGAGC AGACGCCAGA GGTGCAATCG
GCGTCGCCAT TGCTGCAACT GCTGCATCGG CTGCGCGAGT TCGGTTAA
|
|---|
| Protein sequence | MRASVLNIIT KKLSRVAMTL IVVAAAAVAL VKVWSFYTES PWTRDAKFTA DVVAIAPDVS
GLLTSVRVQD NQPVQQGDVL FVVDQPRYQQ ALEEAQADVS YYQALAEEKK RESTRRLRLG
VQVMSREEIE QSGNALQTTQ HQLAKAQAQL ALAKLDLERT VVRAPADGWI TNLNVHSGEF
ITRGTTAVAL VKKDSFYLLA YMEETKLAGI RPGSQVEITP LGSNQILRGT VDSISAGIAN
SSSTVGSKGL ATVDASLEWV RLAQRVPVKI RLTQQWGDRY PAGTTATVLV TGEQTPEVQS
ASPLLQLLHR LREFG
|
|---|
| |