Gene Dd703_3624 details

Gene Information

• Locus tag: Dd703_3624
• ID: 8088933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4207269
• End bp: 4209311
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644837701
• Product: LppC family lipoprotein
• Protein accession: YP_002989204
• Protein GI: 242241023
• COG category: [R] General function prediction only
• COG ID: [COG3107] Putative lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCCTG AAAATTCTGT CCGTACCCAT ACAGCCCGCA TCATCTCTAT CATGTTGGCG 
GTGTTGTTTC TCGCGGGCTG TCCGGGCAAA GCGCCGCAAG AATCCGCTTC TCAGCAGGCG 
GAAGGTAAAG CCGGAGCTTC CTCTGATTAC TATCTGCAAC AGTTGCAGCA AAGCGGCGAC 
AATACTACCA AGACTGATTG GCAATTACTT GCGATTCATG CCCTGATTCA GGAAGGCAGG 
CTGCCGCAGG CTAACGCCCA GTTGAATGCC TTGTCGGAGC AATTGAATGA TCGCCAACTG 
CAGGAACAGC GTCTGCTTAC TGCGGAACTG GCCGCAGCCC AAAACGACAT GACTGTCGCT 
AATACTACGC TGGCGCAAAT GGATGTCGGC CGCCTCTCGC CGCTACAGCA GGAACGCTAT 
TATCAAGTCC AGATCAAAGC CAATCAGGAT CATCCATCGC TGACGCTGAT TCGTGCCTAT 
ATCGCACAGG AACCGCTGCT GCAGGGCGAC GCACATCAAC GCAACATTGA TTTGACCTGG 
ACGGCGTTAA ACAAACTCAG CGTGCAAGAC ATCAACGCCG TGGTCATCAA TGCAAATGAG 
AATGTACTGC AAGGCTGGCT TGATTTGCTC AACGTTTGGC AATCGAAATC CCAAGCCACC 
GATGATCGAA AAGCCGCGGT AGAAGACTGG CAAAAACGCT ATCCTCGCCA TCCTGCCGCC 
AAACAGCTGC CGACGCAGGT CATGCAGCCC GCATCAATGA CGGCAACGAT ACCGTCAACG 
ACAGCGGCGG CCGATGGAGG TAATAGCATT GCATTGTTGC TGCCCCTGAA CGGCCAGGCA 
CAGGTATTCG CCAACGCTAT CCAACAAGGT TTCAGCGCCG CCCGAAGCGG TTTCGCCGCC 
GCCGGCGCGC CAGCGGTGCC ATCGTTGGCG ACTGCGGAAG CGCAACCCAG CAGTGCACCT 
GCCGCTACGC CATCCATCAC GACGCCCACT CTCGCCAATA ACGCAACGGC AATGCCCGCA 
GCGACGCCGC TGACGCCCCC ACCGGCATCA GTCTCCGGCG CCAATGCTAT TCCGGTCAAA 
GTCTACGACA CGTCCAATCA GTCGCTGGCC AATGTCATCG CTCAAGCACA AAAAGACGGA 
GCCACCACCA TCGTCGGGCC ATTGCTCAAA AACGAGGTGG AGCAGCTTCC CAGTTTGAAT 
CCCAGCCTGA ATGTCCTTGC GCTTAACCAG CCGGAGCATA TCCAGCCAAA TACCAATATT 
TGCTATTTTG CGCTCTCCCC CGAAGACGAA GCGCAAGACG CCGCCCAGTT CATCAGCAAG 
CAAGGTAAGC AGCATCCCTT AATTCTGGCG CCACGCGGCA ATCTGGGTGA TCGCGTGGTG 
AACGCTTTCG CCAAAGCCTG GCAACAAAAT GGCGGCGGTA TCGTTCTGCA ACAGCGTACC 
GGCGGTATGT ATGACCTGAA ACAAGCCATC AACAGCGGAG CGGGCATTGC GCTAAACGGC 
CAGCCGGTAG TTATGGCATC TCAATCGCCC TCGTTGCCGT CAACCACGGT TGGAGGGCTG 
ACCATCCCCA CACAGGCGCC ACCACCGCCG AGCGTATCAA CCGATGGCAA TATAGACGCG 
GTTTACATTA TCGCCACACC AGATGAGCTC GCATTGATAA AACCCATGAT CGATATGCGC 
AACAAGGCGC AACATCCGGC GCTTTACGCC AGTTCGCGCA GTTTCCAGGC GGGTCTGGGG 
CCGGATTTCC GCTTTGAAAT GGAAGGGTTG CAGTTCAGCG ATATTCCGTT CCTTACCGGT 
GCGAACCCTG CGCTGATGCA GCAGGCAAGC GCTCAGTTCC GTAACGATTA CTCGCTGGTG 
CGCTTGTTTG CTATGGGAAT GGATGCCTGG AAGCTGGCGA ATAACTTTTC CCAACTGCGT 
CAGCAGCCGG GTAGCACATT GTCTGGCGCT ACCGGCACAC TGAGCGCGAC GCCAGACTGC 
GTTATCAATC GCAAACTAAC CTGGCTGCAA TTTCGTCAGG GGCAACTGGT GCCAGCATCC 
TGA 

 

Protein sequence

MLPENSVRTH TARIISIMLA VLFLAGCPGK APQESASQQA EGKAGASSDY YLQQLQQSGD 
NTTKTDWQLL AIHALIQEGR LPQANAQLNA LSEQLNDRQL QEQRLLTAEL AAAQNDMTVA 
NTTLAQMDVG RLSPLQQERY YQVQIKANQD HPSLTLIRAY IAQEPLLQGD AHQRNIDLTW 
TALNKLSVQD INAVVINANE NVLQGWLDLL NVWQSKSQAT DDRKAAVEDW QKRYPRHPAA 
KQLPTQVMQP ASMTATIPST TAAADGGNSI ALLLPLNGQA QVFANAIQQG FSAARSGFAA 
AGAPAVPSLA TAEAQPSSAP AATPSITTPT LANNATAMPA ATPLTPPPAS VSGANAIPVK 
VYDTSNQSLA NVIAQAQKDG ATTIVGPLLK NEVEQLPSLN PSLNVLALNQ PEHIQPNTNI 
CYFALSPEDE AQDAAQFISK QGKQHPLILA PRGNLGDRVV NAFAKAWQQN GGGIVLQQRT 
GGMYDLKQAI NSGAGIALNG QPVVMASQSP SLPSTTVGGL TIPTQAPPPP SVSTDGNIDA 
VYIIATPDEL ALIKPMIDMR NKAQHPALYA SSRSFQAGLG PDFRFEMEGL QFSDIPFLTG 
ANPALMQQAS AQFRNDYSLV RLFAMGMDAW KLANNFSQLR QQPGSTLSGA TGTLSATPDC 
VINRKLTWLQ FRQGQLVPAS