Gene Dd703_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3506 
Symbol 
ID8089461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4078896 
End bp4079813 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID644837583 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002989087 
Protein GI242240906 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.507532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGT TCATTTTTCA TCGGTTACTG GTTGCGTTGG CGGTGCTGTT CACCGTGGCG 
GTGGTCAGTT TTTCACTGCT GCACCTGTCC GGCGATCTGG CGGCGGCGAT CGCCGGGCCG
GACGCGACCG CAGACACCAT CGCCCAGATT CGGGTACAGA ACGGGCTGGA TCAGCCGCTG
CTGACCCAGT TCTCCCGCTG GATGTGGTCG GCGCTGCACC TGGATTTCGG CCGCTCGTTC
TATTTTGAAA ATACGGTGAT GGAGCTGGTG GGGCAGCGTA TGCCGGTCAC GCTCCAACTG
GGCGTGGCGT CGCTGTTGCT GGCGTTGACG GTGGCGATCC CGCTGGGCGT GCTGGCCGCG
GTGTTCCGCG ACACCTGGGT GGATCGCCTG GCCATGCTGG TGGCGGTGAT CGGCCAGGCC
ATGCCGAACT TCTGGTTCGC GCTGGTGTTG ATCCTGATTT TCGCCGTCGG CCTGAAATGG
TTGCCGGTGG CGGGGAATAC CACCTGGTTG AACTTCGTGC TGCCCGCTGT GGCGCTGGGC
TACTACGCCA TGCCGTCGCT GATGCGTTTA ACCCGTTCCG GCATGCTGGA TGTGCTGGGT
TCCGACTATA TCCGCACCGC CCGCGCCAAA GGGCTGAGCG CGTTCAAGGT GGTGTTCAAG
CACGGCCTGC GCAACGCCAT CATCCCGGTG GTGGCGCTGG CGACAGTGGA ATTGGGGTTC
ATGCTGGGCG GTTCGGTGGT GATCGAATCG GTGTTCTCGC TGCAAGGGCT GGGGCAATTA
GCCTGGGATT CTATCTCCCG TAACGATTTC CCGGTGGTGC AGGCCATCGT TTTGATTATC
GCCGTGTTTT ATATCGGACT GACCTTTCTG GCGGATGTTC TCAATGCGGC ACTGGATCCG
CGTCTGCGCA GCAAATAA
 
Protein sequence
MVKFIFHRLL VALAVLFTVA VVSFSLLHLS GDLAAAIAGP DATADTIAQI RVQNGLDQPL 
LTQFSRWMWS ALHLDFGRSF YFENTVMELV GQRMPVTLQL GVASLLLALT VAIPLGVLAA
VFRDTWVDRL AMLVAVIGQA MPNFWFALVL ILIFAVGLKW LPVAGNTTWL NFVLPAVALG
YYAMPSLMRL TRSGMLDVLG SDYIRTARAK GLSAFKVVFK HGLRNAIIPV VALATVELGF
MLGGSVVIES VFSLQGLGQL AWDSISRNDF PVVQAIVLII AVFYIGLTFL ADVLNAALDP
RLRSK