Gene Dd703_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3462 
Symbol 
ID8089416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4032699 
End bp4033535 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID644837540 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_002989044 
Protein GI242240863 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGCACG ATGTACCTGA GGCGACCGCC AACGCGGATG ATGCGCGAAA CATCGCCGCA 
GATTTTATCG ATACGCACTG CCATTTCGAT TTTCCCCCTT TTACCGGCGA TGAAGCCGCC
AGCCTGGCGC AGGCCGCACA GTCCGGCGTT CACCGTCTTG TCGTGCCCGC CGTCGCCGCC
AGTTATTTCG ATCGTATTCT GGCACTGAGC CAACGCTGGC CGGCGCTGTA TGCCGCGCTG
GGGTTACATC CGTTGTATGT GGCCGATCAT CGTGACCAAC ACCTGAACCA GCTGGAGGTG
CTGTTGAAAC AGCGTTCTTT GCGGTTGGTG GCGGTGGGGG AGATCGGGCT GGATCTTTAC
ATGCCGGAGC CCTGCTTCGC GCGGCAACAG GAACTGCTCG CCGCGCAACT TAGACTGGCG
GCGAAATATG ATTTGCCGGT GATCCTTCAT TCCCGACGTA GCCATGAGCC GCTGGCGCGG
ATGCTGCGTC GCTGTCTGGT GCCTCGAACT GGCGTGGTGC ACGGTTTTGC CGGCAGTTAC
GAGCAGGCGA TGGCGTTTAT TCGTTTGGGG TATTTCATCG GCGTGGGCGG CACCATCACC
TATCCTCGCG CCAGCAAAAC ACGGCAGGCG ATCGCCCGTT TGCCGCTCGA TAGCCTGGTG
CTGGAAACCG ATGCGCCGGA TATGCCCGCC TATGGTTTTC AGGGGCAGCC TAACCGGCCG
GAGCGCATTA CTGCCGTATT CGCCGCGCTG TGCGAGCTGC GTCCCGAATG GCCGCAGGTC
ATCGCCGGTA CGCTGTTGGC TAATTCGCAG CGGCTATTTG CTTTTTCCGA TCGCTGA
 
Protein sequence
MLHDVPEATA NADDARNIAA DFIDTHCHFD FPPFTGDEAA SLAQAAQSGV HRLVVPAVAA 
SYFDRILALS QRWPALYAAL GLHPLYVADH RDQHLNQLEV LLKQRSLRLV AVGEIGLDLY
MPEPCFARQQ ELLAAQLRLA AKYDLPVILH SRRSHEPLAR MLRRCLVPRT GVVHGFAGSY
EQAMAFIRLG YFIGVGGTIT YPRASKTRQA IARLPLDSLV LETDAPDMPA YGFQGQPNRP
ERITAVFAAL CELRPEWPQV IAGTLLANSQ RLFAFSDR