Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3402 |
Symbol | |
ID | 8089355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3976870 |
End bp | 3977385 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644837481 |
Product | Chorismate lyase |
Protein accession | YP_002988986 |
Protein GI | 242240805 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.750194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATG AGGCGTTGGC TCACCTGCAC TCGGTTGAGT GGTGTGCGCC TGAAGTTTTA CCTGCGACAG TCGCAGAATG GTTGACCAGC AGAGATTCAA TGACACGCCT TCTGGAGCGT TATTGTCGAT GTTTGCGCGT TCAGGTAGAG ACTGAACGCT TCGTTGCTTC GCTGAGGATA CCGGAAGAGC CTTCTCTTTT GCCGTTGAGC GAGCGCTATT GGTTACGTGA AGTGACGCTG TTTGGCGATG ATCAACCCTG GCTGTTTGGG CGAACCGTCA TGCCGGAGCA GACGCTAAAA GAAGCGGAAA TCGATTTGAC CCAGATAGGC AATACGCCGC TAGGGCGCTA TCTCTTCCTG CAAGGGCCGC CGGTTCGCGA CTTTATCCAT ACGGGGCGGA GCGGGCAACT TTGGACGCGG CGTTCGCGTT TGTTTCTTGC GGGCAATCCG TTGTTAATCA CCGAGCTCTT TTTACCGGAT GCTCCGATTT ATTTCCCTGA CAGGTATCAG GACTAA
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Protein sequence | MSDEALAHLH SVEWCAPEVL PATVAEWLTS RDSMTRLLER YCRCLRVQVE TERFVASLRI PEEPSLLPLS ERYWLREVTL FGDDQPWLFG RTVMPEQTLK EAEIDLTQIG NTPLGRYLFL QGPPVRDFIH TGRSGQLWTR RSRLFLAGNP LLITELFLPD APIYFPDRYQ D
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