Gene Dd703_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3402 
Symbol 
ID8089355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3976870 
End bp3977385 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content54% 
IMG OID644837481 
ProductChorismate lyase 
Protein accessionYP_002988986 
Protein GI242240805 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.750194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATG AGGCGTTGGC TCACCTGCAC TCGGTTGAGT GGTGTGCGCC TGAAGTTTTA 
CCTGCGACAG TCGCAGAATG GTTGACCAGC AGAGATTCAA TGACACGCCT TCTGGAGCGT
TATTGTCGAT GTTTGCGCGT TCAGGTAGAG ACTGAACGCT TCGTTGCTTC GCTGAGGATA
CCGGAAGAGC CTTCTCTTTT GCCGTTGAGC GAGCGCTATT GGTTACGTGA AGTGACGCTG
TTTGGCGATG ATCAACCCTG GCTGTTTGGG CGAACCGTCA TGCCGGAGCA GACGCTAAAA
GAAGCGGAAA TCGATTTGAC CCAGATAGGC AATACGCCGC TAGGGCGCTA TCTCTTCCTG
CAAGGGCCGC CGGTTCGCGA CTTTATCCAT ACGGGGCGGA GCGGGCAACT TTGGACGCGG
CGTTCGCGTT TGTTTCTTGC GGGCAATCCG TTGTTAATCA CCGAGCTCTT TTTACCGGAT
GCTCCGATTT ATTTCCCTGA CAGGTATCAG GACTAA
 
Protein sequence
MSDEALAHLH SVEWCAPEVL PATVAEWLTS RDSMTRLLER YCRCLRVQVE TERFVASLRI 
PEEPSLLPLS ERYWLREVTL FGDDQPWLFG RTVMPEQTLK EAEIDLTQIG NTPLGRYLFL
QGPPVRDFIH TGRSGQLWTR RSRLFLAGNP LLITELFLPD APIYFPDRYQ D