Gene Dd703_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3374 
Symbol 
ID8089327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3947911 
End bp3948801 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID644837453 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002988958 
Protein GI242240777 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATACGG CAACGTCAAA AACGGCGATG GTCAGCGCCG CGCCGGCGCC GACCGGCGGT 
TACTGGTCCG GCGTACTGAT CCGTCTGCTG CGCGACCCGA CCGGTATGGC TGTCGGCGGC
GTGATTCTTT TGCTGCTGGC GCTGGCGGTG TTCGGCCCTT GGTTGATCGT CAAAGATCCC
TATCAGACGT CCATGTTTAT GCGTCTCAAG CCGATCGGCG CGCCCGGCTT TGTCCTCGGC
TCCGACGAGT TGGGGCGCGA TATGCTGTCG CGGCTGATCC TCGGCACACG GTTGTCGCTG
TTTATGGGGA TCGTCCCGGT CGTGTTCGCC TTTTTTATCG GTGGAGCCAT CGGCATCATC
GCCGGTTATG CCGGCGGACG TGTGAATACG CTAATCATGC GTACCATAGA TATTTTCTAC
GCTTTTCCGT CGGTGCTACT GGCGATCGCG CTGTCCGGCG CGATGGGCGC AGGGATTGGC
AACGCGCTAT TGTCGTTGAC GCTGGTGTTC GTGCCGCAGG TGACGCGAAT CGCCGAGAGT
GTGACGACGC AAGTGCGGCA CATGGATTAT ATCGACGCGG CCCGCGCCAC CGGCGCCAGC
GCGTTTACCA TCATTCGCGT CCAGGTGCTG GGCAATGTGC TGGGGCCCGT TTTTGTGTTT
TCCACCGGGC TGATTTCGGT ATGCATGATT TTGGCGTCCG GCCTGTCGTT TCTGGGACTG
GGCGTTCGCC CGCCGGAACC GGAGTGGGGG TTGATGCTGA ATACGCTGCG TACCGCCATC
TACACCCAAC CCTGGGTGGC CGCCCTGCCG GGCATGATGA TTTTCGTTAC CTCGATTTCC
TTCAACATTC TTGCGGATCG CTTGCGCGCC GCCATGGCTA TCAAGGAGTA A
 
Protein sequence
MDTATSKTAM VSAAPAPTGG YWSGVLIRLL RDPTGMAVGG VILLLLALAV FGPWLIVKDP 
YQTSMFMRLK PIGAPGFVLG SDELGRDMLS RLILGTRLSL FMGIVPVVFA FFIGGAIGII
AGYAGGRVNT LIMRTIDIFY AFPSVLLAIA LSGAMGAGIG NALLSLTLVF VPQVTRIAES
VTTQVRHMDY IDAARATGAS AFTIIRVQVL GNVLGPVFVF STGLISVCMI LASGLSFLGL
GVRPPEPEWG LMLNTLRTAI YTQPWVAALP GMMIFVTSIS FNILADRLRA AMAIKE