Gene Dd703_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3312 
Symbol 
ID8089259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3879464 
End bp3880285 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID644837385 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002988896 
Protein GI242240715 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.159428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TACTGAAAGG CCTGATCTGT TCATTGCCCC TGTTATTGCT GCCGTTGACC 
GGGCAAGCCC GTACGCTGCA ACCCGGCGTA TTGACCATCG GATCGGATCT GACCTATCCA
CCGTACAACT ACCTGCAAAA TAACCAACCC GCCGGTTTCG ACGCCGAGCT AATGGCACTG
ATCGGCGCAC CGCTGAAACT CAAACCCGAA GTGAAAGATA CCCGCTTCGC CAGCCTGATT
CTCGGCATCA AAGCCAGTAA ATTCGATGTC GTTGCCTCCA CGCTTTACGT TACGCCGGAG
CGAGCTGCAC AGGTTTCATT CCTGCCGTAT ATGAAAACCG GCGGCGCCTT CCTGGTGCTG
ACCCACAGCG CCTTTACACC GAAAACGCCG GAAGAGTTAT GCGGCAAGCG CGTCAGCTCC
ATCAAGGGCG GCGCCTGGAT CGCCCGCTTG AACAAAGTGT CCACCGATTA CTGTAAACCC
CACGGACAGG GGCCCATCAC CGTTCAGGAG TTCCCAACCT CGCCGGAGGC AACCCAGGCG
CTGATGTCCG GCGCGGTGGA CGTGCAATAT GAAGACGCTG CGGTCGCCAA ATCCAGCGTG
GAGAAGACCG GCGGCAAACT GAAAATATCT ACCACCAGCA TCGTTTATCC CGTCGTAGTG
GGGTTGGCGG TCAGCAAAGA CAACCCGGAA CTGCTGGCCG ATCTGAAAAA GGCGTTCGAA
CAAAAGATCA GCGACGGCAG TTATGAACAA CTGCTGAAGA AATACAACGT ACAGATGCCA
GACGACCAGG AAGTGGAAAA AGCGCTGGCA GGCACGCTGT AA
 
Protein sequence
MKTILKGLIC SLPLLLLPLT GQARTLQPGV LTIGSDLTYP PYNYLQNNQP AGFDAELMAL 
IGAPLKLKPE VKDTRFASLI LGIKASKFDV VASTLYVTPE RAAQVSFLPY MKTGGAFLVL
THSAFTPKTP EELCGKRVSS IKGGAWIARL NKVSTDYCKP HGQGPITVQE FPTSPEATQA
LMSGAVDVQY EDAAVAKSSV EKTGGKLKIS TTSIVYPVVV GLAVSKDNPE LLADLKKAFE
QKISDGSYEQ LLKKYNVQMP DDQEVEKALA GTL