| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3169 |
|---|
| Symbol | |
|---|
| ID | 8088466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3720107 |
|---|
| End bp | 3720979 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644837243 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002988755 |
|---|
| Protein GI | 242240574 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTCG ACGCCCGCTG GCAACGCTGG CTGCTGCTGA TGCCCGCCGC CGCGCTGTTG
CTTCTGCTGA CCCTCTACCC TATCGGTCAG ATGCTGTTTT ACTCCTTCAA CCAGGTGAAC
TACGCCGCCG GCAGCCATGT CTGGATCGGT CTGGACAACT ACCGCCAGTT GTTCGCCGAC
TGGTTTTTCA CCACCAGCCT GAAAAACACG TTGTTGTTCT CGCTCGGCAG TTCGCTATTA
CAGGTATTGC TTGGCGTACT GCTGGCGCTA CTGCTGTATC GCCATTTCCC CGGTCGTCAA
TGGGTGCTGA GCCTGTTGAT CTACCCGATG ATGATCTCCA CGCTGGTGTG CTCGGCCATC
TGGCGCGTCT GGTTTCATTA CGACTTCGGC CTGCTCAACA ACTGCCTGAC CGCATTGGGA
TTGATGCCGC AACAATGGCT CTCCAGCCCG CGGCTGGCGC TGCCGTCCTT GATGCTGGTG
GATATCTGGC AGTGGACGCC GATGGCCGCG CTGATCATTC TTGCCGGCCT GCAGGCGATC
CCCAAAGAGG TGCTGGAAGC GGCGCAAAGC GACGGCGCCA ATGGCTGGAA GCGCCTGTGG
TACGTCACAT TGCCGTTGAT CCGCCAGCCG ATCATGTTGG CGCTGCTTTT ACGCTCCATC
GACACCTTCA AACTGTTCGA CAAGGTCTAT GCCCTGACCG GCGGCGGCCC CGGCTACGCC
ACCGAAACCT TGTCGCTCTA CATCTACCAG CAGGGATTCA AATTCTTCAA TCTTGGGCTC
GCCAGCGCCG GCGCGGTGGT CATGCTGCTG GTGGCGGGCG CCATGAGCCT GATCTACGCC
TGGCAACTGC TCAGCAAGGA GAAAGCCGCA TGA
|
|---|
| Protein sequence | MHFDARWQRW LLLMPAAALL LLLTLYPIGQ MLFYSFNQVN YAAGSHVWIG LDNYRQLFAD
WFFTTSLKNT LLFSLGSSLL QVLLGVLLAL LLYRHFPGRQ WVLSLLIYPM MISTLVCSAI
WRVWFHYDFG LLNNCLTALG LMPQQWLSSP RLALPSLMLV DIWQWTPMAA LIILAGLQAI
PKEVLEAAQS DGANGWKRLW YVTLPLIRQP IMLALLLRSI DTFKLFDKVY ALTGGGPGYA
TETLSLYIYQ QGFKFFNLGL ASAGAVVMLL VAGAMSLIYA WQLLSKEKAA
|
|---|
| |