| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3120 |
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| Symbol | |
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| ID | 8088417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3656001 |
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| End bp | 3657674 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644837195 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002988707 |
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| Protein GI | 242240526 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.501715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGG ATTTTCAAAA TGAACTTTTT GAACAATCTG ATATTTCCAC TGCGATACTC
AATCTCAAAG GGAATTTTGT CAAAGTTAAT GTAGCATTCT GTGAACTGCT TGACATCAGC
AGGGAAAATA TTGAAGGGTG CCCTTTCCGT AAGCTGTCTG CTATTAATGA TGCTAGCGGA
TACATATCAA TAATTAGCGC ATTATTGAAA GATGAACTCA AAAGTTCTTT TTTTTATCAC
ACTTTTCAGA AAGGCGATGG TAGCCCTATC CAAACGCTTA TCCACATAGG TGTTATAAAA
AAAGATAACC AGGTAATGTA TTTTTACTTA CATGCTTATG ATACGGCCTT TTTCAAGAAC
AATGATCCAA GCTTAGTTGG GAAAAATCAT TTCCCCGACT CAACACCGCC TGATGAGACG
GATCGATTCG ATACTTTCAT CAACAATAAG AAAGAGGCAT TCATTGAATT TAATGAGCAT
GGCTGCGCCA CAAAATTCAA TGTTGCAGCC AGGAATATGT TCCAGCTGGA TGAGCGAGTA
TTAAACCATA AAATATGTGA AAAAATTATT TTCCCTAAAA AAAGAAGCAC GCTGGGGGCT
TCGTTTTCAG ACATATTCAT GGCTCACTCA GAACGTCATG GTGGTTTCAA AAAACGTTTT
TACGGAAAAG GTAAAGATGG CAACAGGTTC CCCATTGAAA TAACCACCAA TACCTATCAG
GTTAATAATA AAAACTATTA CTCCATTTCT ATTACAAATG TCAGTAATCG GGTTGAAAAT
TTAAAAGCGT TAATTCACCG CCAATTACGA TTAAGCGAGA TCGTTGACAG CATCCCTGCG
TTAGTTGCCC ACGTGGATAA AAACCTCAAT TTTACATTTA TCAACAACAT GTATGAACAA
TATTTCTCAT GTAAACCGGA AAGCATACTA AACACATCGG TTTTCCATTT TTATGACCGT
AAATTTTTCT CTCCGGCGGA TTTCAAAATC AAAAAAGTCT ATGAGAAAAT AAGTTACTCA
TTCGAGAAAA CGATAGAAAT TAATGGTGAG AATGTTGTTT TCAACAATAC GGTGATACCC
GCCAAGAAAC TTCAGGATGG TTTTTACCTT TTAACAAATG ACATCACTGA ATTCAGAAAC
CAACAAGATG TATACCGCTA TGACGCTAAT CATGATCTGT TGACGGGATT ACCCAACCGC
CGCGCAATTG ATGACTACCT TGAACATTAT CGGAATCCAG AATTAAAAAT ACGCCATGAT
GATTATGGTA TCGGTGTTTT ATTTTTTGAC TTAAACGGTT TTAAAGAAAT CAACGACAAC
TACGGGCATG ATTTTGGTGA TAAAACCCTG ATCAAATTCT CACAGATTGT GAAAGAAAAC
ATTCAACATG ATGATTTCTT TGCCCGTCTA TCAGGCGACG AGTTTTTGTT AATCATTGAG
CGATCAAAAT TTAACGTTCT GGAATCCGAA GCGGAGTTAC TGGTTAAAAA AATCCACTCG
AACCTGACCT CGCCAGTGAT TATCGATGAT ATCGAAATCA CGATAAGAAC CAGTATTGGT
GTTTCGTTAA GGAAAAATAA TCAGAATATT AATATTGAAA ACTTAATCAT TGATGCAGAT
AAACGAATGT ATAAAAACAA GAGGGAACTG AAATCTCATC TGTTATCAAG ATGA
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| Protein sequence | MIADFQNELF EQSDISTAIL NLKGNFVKVN VAFCELLDIS RENIEGCPFR KLSAINDASG
YISIISALLK DELKSSFFYH TFQKGDGSPI QTLIHIGVIK KDNQVMYFYL HAYDTAFFKN
NDPSLVGKNH FPDSTPPDET DRFDTFINNK KEAFIEFNEH GCATKFNVAA RNMFQLDERV
LNHKICEKII FPKKRSTLGA SFSDIFMAHS ERHGGFKKRF YGKGKDGNRF PIEITTNTYQ
VNNKNYYSIS ITNVSNRVEN LKALIHRQLR LSEIVDSIPA LVAHVDKNLN FTFINNMYEQ
YFSCKPESIL NTSVFHFYDR KFFSPADFKI KKVYEKISYS FEKTIEINGE NVVFNNTVIP
AKKLQDGFYL LTNDITEFRN QQDVYRYDAN HDLLTGLPNR RAIDDYLEHY RNPELKIRHD
DYGIGVLFFD LNGFKEINDN YGHDFGDKTL IKFSQIVKEN IQHDDFFARL SGDEFLLIIE
RSKFNVLESE AELLVKKIHS NLTSPVIIDD IEITIRTSIG VSLRKNNQNI NIENLIIDAD
KRMYKNKREL KSHLLSR
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