Gene Dd703_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3110 
Symbol 
ID8088407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3647467 
End bp3648303 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID644837187 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002988699 
Protein GI242240518 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA CATCACCGAA AATAAGCATC AAAGTAATAG CCAGCGTGCT GGCATTATTG 
GTTCTCTCCG GTTGTACGCC GACCGAAGAG AAAAAAGAAA CCAGCGCGGC GCCGCAATCC
GCCCTGCAAA ACGTACTGCA ACGCGGCACG CTGCGTGTGG GGGACTGTCT CAGCTTCGCG
CCGTTCGGCT TTTACGATAA AAACGGTGCT CCGGATGGTT ACGATGTCGA TTTGGCCAAA
GCACTGGCCA AAGCGATGGG CGTAAAACTG GAGATGGTCA ACACCACCAG TGCTAACCGC
ATCCCGAACC TGCAAACCAA TAAAGTCGAT GTCGTGTTTT GCAACTTCAC CCGCAATCTT
GAACGCGCCA AAGAAATCGG CTTCACCAAT CCTTATGTGG TAGCGAGTGA GGCGATGTTG
GTGCGTAAAA ACAGCGGTAT TCAATCGGCT CATGATATGG CCGGTAAAAC CATTGCCACG
GTAAAAGGCT CTACCAATGG CGACGACGTC CGTAACCTCG GCATTGACGT GAAAATCCAG
GAATACGATT CATCGCAGGC CGCCATCCTG GCGATTAAAC AAGGCCAGGC CGATGCGATG
GTCGAAGATA ACAATTTCCT CGCTTATCAA GCCAGCCTTG ATCCGACGCT GATCGTAACG
AATGAAGCGC TGGTTCCGTT GGAATACAAC GCCTTTGGCG TTAAACAAGG GGATCAGGTG
TGGACTCATT ATCTGAATGA ATTCCTGTTC GAAATCAATG CCTCCGGAGA GAACGCGGCG
TTGTATCAAA AATGGTTCGG CAGCAAACCG CGTTATCCCC TGAATCCACA GTTTTGA
 
Protein sequence
MNATSPKISI KVIASVLALL VLSGCTPTEE KKETSAAPQS ALQNVLQRGT LRVGDCLSFA 
PFGFYDKNGA PDGYDVDLAK ALAKAMGVKL EMVNTTSANR IPNLQTNKVD VVFCNFTRNL
ERAKEIGFTN PYVVASEAML VRKNSGIQSA HDMAGKTIAT VKGSTNGDDV RNLGIDVKIQ
EYDSSQAAIL AIKQGQADAM VEDNNFLAYQ ASLDPTLIVT NEALVPLEYN AFGVKQGDQV
WTHYLNEFLF EINASGENAA LYQKWFGSKP RYPLNPQF