Gene Dd703_3068 details

Gene Information

• Locus tag: Dd703_3068
• ID: 8089904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 3589965
• End bp: 3591812
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644837149
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_002988661
• Protein GI: 242240480
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
• TIGRFAM ID: [TIGR01733] amino acid adenylation domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATC TGACCGAGCC TTCTCTTGAT AAGCTGGGGG ATAGCGCTAC TCTCACGGCA 
TTCGGTTTCG AACCCCGTTC ACTACCGGAT CTGATCAGAT ATCAGGCGCG TTGGCATCCG 
CAGCGGCTCG CCCTCATGTC CGAAGAAGGC GAGCTCACGT TCGCACAGCT TGATGAGCAT 
AGCAATCGGC TGGCGCAGGC GTTGGCCGAA CAGGGCGTCG GCTATGGTCA TCGGGTGGCG 
CTGCAGGGCG AAAAATCACT GATGTTTGTG CTGCTCCAAC TCGCGGTGTT GAAATTGGGG 
GCGGCTTTTA TACCTCTTGC CTCTGGTCTT CCTGCCCTCA GGCGCGCCAA GATGTTGGCC 
GATGCCAGTC CATGCGCACT CATTATTGAA GATGGGCTTA CGCGTGCTGG CGAATCGGTC 
GCGGGGACGA TGCTGTTAAC CTGGTCGGAG GTCGAGAACC GTTCATCGCG GCTACCCGCC 
GTTGATCCTG ATATTCCGCT GTTAGAACAA GATATCGCCT GGGTATTTTA CACCTCGGGT 
TCTACCGGCA CCCCGAAAGG CGTGCTGGGG ACACACGGCG CATCGCTAAA ACGCTGTGGC 
GCGATGGCGA CACTACAGCC GATTTCTTCG CAAGAGGTCA TTGCCCATGT CATGCCCGAT 
ACCGCGATTG ACGCGATTTG GGAAGTATGG GCGCCATTGG GATTTGGCCT GCCAGTGGTG 
CTTATTGATG TCCAGCGTTA TACCGATCTT GAACAGGTCG TGGCGCTGTT AGCCCGTCAT 
CAGGTTACGC AGATATGCAT AGTACCGGCT TATCTGACGC TGTTATTAAA CAGTGGGCTG 
CCGCTGGGCA ACATGCTGCC ATCACTAAAT ATCTGGATCT CCACCGGGGA GCGTGCTTCC 
CGCGCGCTGG TTGATCTGTT TTTCCATCAT CTGCCGGCGG CGCAATTACT GAACCAATAC 
GGTTTGACCG AAACCTTGGC GACGGCAACG TGCTTTACCA TGACGACAGC ACAACAGGGC 
GAAGGTCGCG TGGCGATTGG AACGGAGATT GACCATATTC AGGCTTGGGT GTTGGACGCA 
CATTTTCATC CCCTTGGTGA AAATGCAGTG GGGCAGTTAT GTATGGGGGG AGAGGCGTTG 
GCATTGGGCT ATCTTGCCTC CCCTGCGCTG ACCGCTGATC GCTTTCGTCC CAATCCGTTC 
GCGACCGATG GCTCGCGTCT GTATCTGTCT GGCGATTTAG CGTCGAGAGA TAAAAATGGT 
CAACTGCATT ATCACGGGCG GGAGGATCGA CGCGTCAACG TGCTTGGTCA CCGCATCGAA 
CTCGGGGACA TTGAGGCCGC TATAGAGGCG ATTCCTGAGG TTGCTCAAGC CGCCGTTGTG 
TATAGGGAGC ATAACGATCA GACGGAAATT TACGGATTTT ATGTTGCAAG CGATGCCTTA 
ACGCTACGGC AGGTCATCAA TCACCTTAAC GAGCGTCTAC CTTGTTACAT GGTTCCCATT 
CAGCTATTTC CATTGTCGGC ATTACCGACA CTGCCCGGTG GCAAAACGGA TTATCGCGCG 
CTGTCCGCCA AGATAGCCTT GGATCAGGTT ACGACGGATT GCGATAGCAA CAGCGTTGAG 
CAGCGATTAT TGACGATCGT CGGCCAGTTG CTCGACACCG ATATTCCCAA CCTAAACGTG 
AACTTTTTTG ATTATGGCGG CAATTCGATT ATTGCTATCC GCCTTATCAA CGAGGTTCGC 
CGTCATCTGC ACGTCATCAT TGAGAACGCG GAGATCTATA ACGCTGAAAC CCTCAGTGCA 
CTGGCTCAGA CCATTCGCCG TAAGCAATTC TTTCAGGAGG CATCATGA 

 

Protein sequence

MINLTEPSLD KLGDSATLTA FGFEPRSLPD LIRYQARWHP QRLALMSEEG ELTFAQLDEH 
SNRLAQALAE QGVGYGHRVA LQGEKSLMFV LLQLAVLKLG AAFIPLASGL PALRRAKMLA 
DASPCALIIE DGLTRAGESV AGTMLLTWSE VENRSSRLPA VDPDIPLLEQ DIAWVFYTSG 
STGTPKGVLG THGASLKRCG AMATLQPISS QEVIAHVMPD TAIDAIWEVW APLGFGLPVV 
LIDVQRYTDL EQVVALLARH QVTQICIVPA YLTLLLNSGL PLGNMLPSLN IWISTGERAS 
RALVDLFFHH LPAAQLLNQY GLTETLATAT CFTMTTAQQG EGRVAIGTEI DHIQAWVLDA 
HFHPLGENAV GQLCMGGEAL ALGYLASPAL TADRFRPNPF ATDGSRLYLS GDLASRDKNG 
QLHYHGREDR RVNVLGHRIE LGDIEAAIEA IPEVAQAAVV YREHNDQTEI YGFYVASDAL 
TLRQVINHLN ERLPCYMVPI QLFPLSALPT LPGGKTDYRA LSAKIALDQV TTDCDSNSVE 
QRLLTIVGQL LDTDIPNLNV NFFDYGGNSI IAIRLINEVR RHLHVIIENA EIYNAETLSA 
LAQTIRRKQF FQEAS