Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2651 |
Symbol | |
ID | 8088337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3103218 |
End bp | 3103940 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644836722 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002988250 |
Protein GI | 242240069 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0430594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGACCC TGTTAGGTTT CAGTGAACGG GGGTGGGGCG GCCTGTTGTT GATGGCCGCA TTAACCACTC TGTGCCTGAC CGTTGCGGCT CTGCTCATCG GTTCGTTGGT CGGCGCGGCG GTAGCGGCGG CCAAGCTCTC GTCGCGCCGC CGTTGGCGCG TGGCGGGTGA AATCTACTCC GTGGTGTTTC GCGGGATCCC GGAATTGTTG ATCATCTATC TGTTTTATTT CGGTGGTTCC GGCGTGCTGA CGCAGGTGGG GCGTTGGTTC GGCGCCGATG GCTTTATCGA ATTGCCGCCG TTTCTGATCG GCGCGCTGGC TATCGGGTTG ATTTCCGCTT CATACCAGGG GGAGGTGTAT CGCGCCGCCC GCCTGGCCGT CAATGCCGGA GAATTGGAGG CCGCGCTGGC GATGGGGATG CCGGCCTGGC GCCGGGCGTA CCGGATTCTG TTGCCGCAGG TGGCGCGCTA TGCGCTGCCG GGGTTGTCCA ACGTCTGGCA GATGAGCCTA AAGGATTCCG CGCTGGTGTC CGTGACCGGC ATTGTCGAAG TGATGCGCGC CAGCCAGATG GCTGCCGGAT CGACGCGGCA GTATTTCCTG TTTTACCTTG CTGGTGCGGC CATTTATCTG ATTCTGACAG TGTTTTCCAA TATCTCGTTC GCTCGTCTGG AACAGAAAAT GTCTCAACCA CACCAGCGTC GAACGCACCA GGAGACGATA TGA
|
Protein sequence | MLTLLGFSER GWGGLLLMAA LTTLCLTVAA LLIGSLVGAA VAAAKLSSRR RWRVAGEIYS VVFRGIPELL IIYLFYFGGS GVLTQVGRWF GADGFIELPP FLIGALAIGL ISASYQGEVY RAARLAVNAG ELEAALAMGM PAWRRAYRIL LPQVARYALP GLSNVWQMSL KDSALVSVTG IVEVMRASQM AAGSTRQYFL FYLAGAAIYL ILTVFSNISF ARLEQKMSQP HQRRTHQETI
|
| |