| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2626 |
|---|
| Symbol | |
|---|
| ID | 8087017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3074120 |
|---|
| End bp | 3075631 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644836697 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002988225 |
|---|
| Protein GI | 242240044 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.253128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCC GTCATACGTT GTTGACCGCA GTCGGTGGCC TGATGTTGTT CGGGGCCAGT
CTTTCCTCGC AGGCAGAGAG TACCCTTCGT ATCGGGCTGG GGGCGGATCC GGACATGCTG
GATCCGCATC TGGCGCGAAC CTACTACGGC CGTTTCGTGT TCGCCGCGCT GTGCGACCGG
CTGGTCGATG TGGACGAGCA CCTGAAGGTC GTCCCCGGTC TGGCGACGGA CTGGTCGTGG
AGCGACGACG GCAAAACCCT GACCATGAAC CTGCGGCAGG GGGTGACATT CCAGGACGGC
GAGCCGTTCA ACGCCGAGGC GGTGAAATTT AATATCGAAC GGGCGCTGAC CTTGCCGGGG
TCGATACGCA AAAGCGAGAT CTCCTCTATC GAGCGGGTGG ACGTCACCGG GCCTTATCAG
GTGGTGTTTC ATCTGAAAAC CCCGGATGCG GCGTTGCTCA GCCAATTGAC CGATCGCGCC
GGCGCGATGC TGGCGCCGCA GGCCGCCGCC AAACCGGATT TCGCCATGCA TCCGGTGTGC
TCCGGGCCAT ATGCGTTTGA AAGCCGGGTG CAGCAGGATC GCATCGTGCT GAAACGCTTT
GAAAACTACT GGAACAAGGC GGCTTACCAC TTCGACAAAG TGGTGTTCCT GCCGATCCCC
GACGCCTCGG TGCGGCTGGC CAACCTGCGT GCCGGCGATC TGGATCTGAC GGAAGGTATC
GCTCCGACGG ACATCAAAAC CGTGGAGTCC AACCCCAACC TGCGTCTGGC GAAGGTGACG
GGGCTCGGCT ATCAGGGCAT CACATTCAAT ATCGCCAACG GCAAGGTTGA GCCGAACAGC
CCTTTCAGGG ATGCGCGGGT GCGTCAGGCG TTCTCGCTGG CGATCGATCG CGATGCGCTG
AATCAGGTGG TGTTTGAAGG CCAGTTCGAC CCGGCCAATC AGGCTTTTTC GCCGGTGAGT
CCTTATCACG TCAACACGCC GATCAGTGCG CGTGATGTCG ATAAAGCCAA GGCGTTGCTG
GCGGCGGCGG GCGTGAAAAC ACCGGTCAAT GTGGTGCTGC TGGTGACGAA TAATCCCACG
GCGCAACAGG CAGGGCAGGT GATCCAGGCG ATGACTGGCG AAGCCGGTTT CAACGTCACG
TTGCAGATGA GCGAATTCGC GACGCTGCTG TCCCGCCAGC AGAGCGGCGA GTACCAGCTC
AGCCTGTCGG GATGGTCAGG GCGCCCGGAT CCGGACGGCA GTATTTTCTC GTTCATCCAC
AGCAAAGGCA CGCTCAACGA TGGGCGCTAC AGTAACCCGC AGGTGGACGA GTGGCTGACG
CAGGCGCGCC AGACCAATGA CATCGCCGCC CGTCAGGCGC TGTACGGCAA GGTGGTGAAT
CAATTGCAGA CCGACATGCC GATTGCCTAT CTCTACTTCG AGCCGCGCAT CTTCGGTATG
ACCAACAAGC TGAACGGCTT CACGCCGTCG CCGGATGGTC TGGTGCGGCT GGCCGGCGTC
AGCCTGAAAT AA
|
|---|
| Protein sequence | MKVRHTLLTA VGGLMLFGAS LSSQAESTLR IGLGADPDML DPHLARTYYG RFVFAALCDR
LVDVDEHLKV VPGLATDWSW SDDGKTLTMN LRQGVTFQDG EPFNAEAVKF NIERALTLPG
SIRKSEISSI ERVDVTGPYQ VVFHLKTPDA ALLSQLTDRA GAMLAPQAAA KPDFAMHPVC
SGPYAFESRV QQDRIVLKRF ENYWNKAAYH FDKVVFLPIP DASVRLANLR AGDLDLTEGI
APTDIKTVES NPNLRLAKVT GLGYQGITFN IANGKVEPNS PFRDARVRQA FSLAIDRDAL
NQVVFEGQFD PANQAFSPVS PYHVNTPISA RDVDKAKALL AAAGVKTPVN VVLLVTNNPT
AQQAGQVIQA MTGEAGFNVT LQMSEFATLL SRQQSGEYQL SLSGWSGRPD PDGSIFSFIH
SKGTLNDGRY SNPQVDEWLT QARQTNDIAA RQALYGKVVN QLQTDMPIAY LYFEPRIFGM
TNKLNGFTPS PDGLVRLAGV SLK
|
|---|
| |