Gene Dd703_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2567 
Symbol 
ID8086957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3011646 
End bp3012335 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID644836637 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002988166 
Protein GI242239985 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.386415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTATG GCTATTCCGA ACTGATCATG GATGGCGCGC GCATGACGTT GCAACTGGCG 
ATATGCTCGC TGGTGCTGGC TTTGGTCATT GGTCTGGTTG GCGCGGCAGC CAAGCTGTCT
TCCAGTCGGC TGCTGTCGGG GTGTTTTTCC GCATATACCA CGCTGATTCG CGGTGTACCG
GATCTGGTTT TGATGTTGCT GATTTTTTAC GGGCTGCAGA TGGTGCTCAA CAGCCTGACC
GACACGCTGG GTATGGAGCA AATCGATATC GATCCTCTGG TGGCCGGCAT CATCACGCTG
GGATTTATCT ACGGCGCCTA TTTTACCGAA ACCTTCCGTG GCGCTTATCT GGCTGTGCCT
CGCGGGCAGA TTGAAGCGGC GGTCGCGTTT GGTTTTTCGC CGATGAAAGT ATTTCGTCGG
ATTATGTTTC CTTCCATGAT GCGTTTTGCA CTCCCCGGGA TTGGCAATAA CTGGCAGGTG
ATCCTGAAGG CGACGGCGCT GGTTTCGCTG CTGGGGTTGA GCGATGTCAT CAAAGCGACT
CAACTGGCGG GGAAAGGCGC GCACCATCCT TTCTTTTTCG CCATTGTGGC GGGGGCGCTG
TATCTGATTT TTACCACCCT GTCCAACGGG GTGCTGTGGT GGCTGGAGAA ACGCTACTCC
GCAGGGGTCC GGAAGGTTAA CTATGAGTGA
 
Protein sequence
MLYGYSELIM DGARMTLQLA ICSLVLALVI GLVGAAAKLS SSRLLSGCFS AYTTLIRGVP 
DLVLMLLIFY GLQMVLNSLT DTLGMEQIDI DPLVAGIITL GFIYGAYFTE TFRGAYLAVP
RGQIEAAVAF GFSPMKVFRR IMFPSMMRFA LPGIGNNWQV ILKATALVSL LGLSDVIKAT
QLAGKGAHHP FFFAIVAGAL YLIFTTLSNG VLWWLEKRYS AGVRKVNYE