Gene Dd703_2500 details

Gene Information

• Locus tag: Dd703_2500
• ID: 8086890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 2931908
• End bp: 2932339
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644836571
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_002988100
• Protein GI: 242239919
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTCA CGCTACAGCA GTTCCTCTCA GCGGTGGGTG ATGCCGTGAT TATTTGCGAT 
GCCGACGGCA TCATCACCGC CTGGAACCCC GCAGCCGAAC GTCTGTTCGG CTTCACCCAG 
GGCGAGGCGC TGGGCGCCTC GCTCGACATC ATCATTCCCG AGCGGCAACG CCAGCGGCAC 
TGGTCTGGCT ACCACCAGAC CCTGCACAGC GGCACCACCC GATACGGCAC CTCGTTACTT 
AACGTACCGG CCCTGACGCG TGACGGCGGC ACGATTTCCA TCGCCTTCAC CGTGGCCTTG 
CTGCCTGGGG AGGCGGGGCA GCCAGCCTCC ATCGCCGCCA TCATCCGTGA CGACACGACA 
CGCTTCAACG AAGAACGCAC GCTGCGCAAG CGTCTGGCTG AGGCAGAACA GCAAGCAAAG 
CGACCGACAT AA 

 

Protein sequence

MALTLQQFLS AVGDAVIICD ADGIITAWNP AAERLFGFTQ GEALGASLDI IIPERQRQRH 
WSGYHQTLHS GTTRYGTSLL NVPALTRDGG TISIAFTVAL LPGEAGQPAS IAAIIRDDTT 
RFNEERTLRK RLAEAEQQAK RPT