Gene Dd703_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2322 
Symbol 
ID8086709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2733914 
End bp2735095 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID644836396 
Productsugar efflux transporter 
Protein accessionYP_002987928 
Protein GI242239747 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCG CATCACCCTC GCGCGCCACC GCCTGGCTGC GCGTGGTCAC ATTGGCTATC 
GCCGCGTTTA TCTTCAACAC CACAGAATTT ATCCCGGTCG GCTTGCTGAG CAATATCGCC
GACTCTTTCC AGATGAAGAC TGAAGATGTC GGGTTGATGA TCACCCTCTA CGCCTGGATC
GTGGCCGCGG CATCCCTCAT CTGTATGCTG TTAACCAGCG CCGTTGAACG ACGGCGCTTG
CTGATCGGTA TTTTCGGGCT GTTTATCATT AGCCATCTGA TCTCTGCCGC CGCCTGGAGC
TTCAATGCCC TGCTGCTTTC CCGCATCGGC GTGGCGCTGG CGCACTCCAT TTTCTGGTCG
ATTACGGCCT CGCTGGCGAT TCGCCTTGCC CCGCCGGGCA GGCGCGCCCA GGCGTTAGGG
CTGATCGCCA CCGGTTCGTC GCTGGCGATG ATCATCGGAT TACCGCTGGG ACGTGTGGTG
GGGCAATACA TGGGCTGGCG CACCACGTTG GTACTTATCG CCGTTGGCGC CACTATCGCG
CTGATCCTGC TGGCCCGCTT GCTCCCGCGG CTGCCCAGCG AACATTCCGG CTCACTCGCC
AGTCTTCCCA CACTGTTCAA GCGCCCGGAA CTGGTGACTA TCTACCTGAC CACCGTGATG
GTGGTGACGG CGCACTTCAC TGCTTACAGC TATATCGAGC CGTTTATCCA AACGGTGGCT
CAGTTGCCGG AAAACTTTAC CACCTTGATC CTGTTGCTGT TCGGTATTGC GGGCATCGGC
GGCAGTATGC TCTACAGTCG CTACAGCGAA CGCTTTCCCA CCGGTTTCAT CATCACGGCG
ATGCTGTTGC TGGTTATTAG CCTGACACTG CTGAAACCGC TGTCCGGTTA TCCGCTGGGG
CTGACGCTGC TCTGTCTGGT ATGGGGGCTA TCCATGATGG CATTGGGGCT GGCGATGCAG
GCCCGGGTGC TAATGCTGGC GCCGGACGCC AGCGATGTCG CGACATCGAT TTATTCCGGG
TTGTTTAACC TCGGTATCGG CGGCGGCGCT TTACTGGGCA ACATGATCAG CCTGCATCTG
AGTATGGACA AGATCGGTTA TATCGGCGCT CCGCTGGCAC TGCTCCCACT GTGCGGCATG
CTCGTCGGCG CTTATCGTAG TGTGCATCCT ACCCGAGCCT GA
 
Protein sequence
MTSASPSRAT AWLRVVTLAI AAFIFNTTEF IPVGLLSNIA DSFQMKTEDV GLMITLYAWI 
VAAASLICML LTSAVERRRL LIGIFGLFII SHLISAAAWS FNALLLSRIG VALAHSIFWS
ITASLAIRLA PPGRRAQALG LIATGSSLAM IIGLPLGRVV GQYMGWRTTL VLIAVGATIA
LILLARLLPR LPSEHSGSLA SLPTLFKRPE LVTIYLTTVM VVTAHFTAYS YIEPFIQTVA
QLPENFTTLI LLLFGIAGIG GSMLYSRYSE RFPTGFIITA MLLLVISLTL LKPLSGYPLG
LTLLCLVWGL SMMALGLAMQ ARVLMLAPDA SDVATSIYSG LFNLGIGGGA LLGNMISLHL
SMDKIGYIGA PLALLPLCGM LVGAYRSVHP TRA