| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2175 |
|---|
| Symbol | |
|---|
| ID | 8086561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2563545 |
|---|
| End bp | 2565137 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836251 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002987784 |
|---|
| Protein GI | 242239603 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.746333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTT TCCAGAAATT AACAATAGCT ATCACCATTT TCGTACTGTC GCTCATCGGT
GTGGGCGGGT ATGGCATTAA AGCGCTCGGG GAGTCAAAGG ATCGGGTTGA ATACGTCACG
GGAAATACGT TGCCCAGTCT TACTTTATTG TCTAACTCGA ACATCAATGT ACGTGAAGTA
CGGGCATCGC TCAGCTCGCT GAGCAACATG GAGGATCAGG GGCAACGTGT GGCGCTGTTG
AAATCCACGC TGGACAAGCT GACAAGCGTG GACAAGTTCA TGGCGGACTA CAAGCAGAAC
TATATTGCCG ATGCTCACGA CGCGCAGATG ACCGATTACA TCATTCAACA ACTGACGTTG
TACCGTCAGG CTATTGATAA TGTTTATAAA GGCGGAACCC AGCAGAGCAC CACGGACACC
GCAGCGGAAA ATACTAAAAA GCAGGTTGAG CAGGCATTGA TTAAAGCGTT GCAGGATCAA
CGTGATTACA ACCTGAAGCT GGCCGATACA CAGGAAAAAT CTAATGAGGC GAGTTATCGC
GCCGCGCTGT ATACCTTTGT CGGCCTGATC GTTGCCTCGG TGGCGGTGGC CGGTACGCTG
GCGTTGATGA TTTTGTTGTA TGTCCGTCGC AGCCTGAATC ATCTGCAACA TACCTTGCTG
ACGATCAGCG ACAATCTCGA TCTCACGCTG AGAGCAGACG ACAGCCGTCA TGATGAAATC
GGCAAGACTG CGCAGGCGCT CAACAACCTG ACCGACCGTT TCGCCACCGT ACTGGCGGAT
GTGCGGATGT CCAGCGAGAG TGTGGCGACC GCATCCAGCG AGATTGCCGC AGCGAATATT
GATCTGTCGT CCCGCACCGA AGAACAGGCC GCGTCGCTGG CGCAAACCGC CGCCAGCATG
CATGAAATCT CCTCCACCGT GGAAAGCAAC GTCGAAAATG CCCGGCAGGC CAACCAGCTT
GGCCAGAAGG CGGCGGAAGC CGTGACCCAC GGCGATGTGT CGGTTGAACG CATGATGCAG
GCGATGAAAG GCATTGCTTC CGGGTCGGAA AAAGTGGCGG AGATCACCAA CCTGATCGAA
GGCATCGCTT TCCAGACCAA TATTCTGGCG TTGAACGCGG CGGTGGAAGC AGCGCGCGCC
GGCGAGCATG GCCGCGGCTT CGCCGTGGTG GCAGGCGAAG TGCGCACGTT GTCGCAACGT
TCCTCTTCCG CCGCCAGAGA AATCAAAACG TTGATAGACA ATGCCATTGC GGCCGTGAGA
AACGGCTCGC AGCAGGCGGA TGATGTGCGC GAGGCCATCG GTAATGTCAA AACCCTGATC
ACAAACACGT CATCGCTGGT GGGTGAAATG TCGCTGGCGT CGGAAGAGCA GAGCCGCGGC
ATCAGCCAGA TCAACGTAGC GATCAACCAG ATGGAGGCGG TAACGCAGCA GAACGCCGCG
ATGGTGGAAC AGGCGTCGTC GGCGGCGGAA TCGCTGAACG ATCAGGCGAC GAGATTGCGT
CAGTTGGTGG AAACGTTCCG GCTGAGAGAG GGGGGCGCGC ACGCATCGTC GGATGACGCT
TTGTCGTCTC GGTTGGCGTT AGGGATGAAA TAA
|
|---|
| Protein sequence | MTIFQKLTIA ITIFVLSLIG VGGYGIKALG ESKDRVEYVT GNTLPSLTLL SNSNINVREV
RASLSSLSNM EDQGQRVALL KSTLDKLTSV DKFMADYKQN YIADAHDAQM TDYIIQQLTL
YRQAIDNVYK GGTQQSTTDT AAENTKKQVE QALIKALQDQ RDYNLKLADT QEKSNEASYR
AALYTFVGLI VASVAVAGTL ALMILLYVRR SLNHLQHTLL TISDNLDLTL RADDSRHDEI
GKTAQALNNL TDRFATVLAD VRMSSESVAT ASSEIAAANI DLSSRTEEQA ASLAQTAASM
HEISSTVESN VENARQANQL GQKAAEAVTH GDVSVERMMQ AMKGIASGSE KVAEITNLIE
GIAFQTNILA LNAAVEAARA GEHGRGFAVV AGEVRTLSQR SSSAAREIKT LIDNAIAAVR
NGSQQADDVR EAIGNVKTLI TNTSSLVGEM SLASEEQSRG ISQINVAINQ MEAVTQQNAA
MVEQASSAAE SLNDQATRLR QLVETFRLRE GGAHASSDDA LSSRLALGMK
|
|---|
| |