Gene Dd703_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2090 
Symbol 
ID8088257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp2475687 
End bp2476328 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID644836166 
Productphage baseplate assembly protein V 
Protein accessionYP_002987699 
Protein GI242239518 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.041892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAT ACGACTATCT TTCAGAGATC CAACGCACCC TACGCAACCT GATTCGTATC 
GGTGTCGTCA CGGACGTCGA TACCCAGCAG GCGCGTTGCC GCGTACAAAC CGGCGGCATC 
ACCACCGGGT GGCTTAACTG GCTATCCCGC CGTGCGGGCA GCTCCCGTGA ATGGTGGGCG 
CCTTCCACCG GTGAACAGGT GCTTTTGCTC GCCATCGGTG GAGAGCTCAA CACCGCATTC 
GTACTGCCGG GTATCTACAG CAACCAGCAT CCTGCGCCTT CGACGTCCGC TGATGCTTGC 
CATATCCAGT TCCCGGACGG CGCAGTGATG GAATATGAGC CCGCCACTGG CGCGCTCATA 
GTCGCCGGCA TCAAAACAGC CAGCGTAACG GCGGCGGAAT CTGTGGTCGT TACCACCAAA 
AATGTCACCG TCAATGCCAT CGAACGCATC ACGCTCGCTA CCCCCGAGGT TGTCTGCACC 
CACAAGCTGA TCACTCAAAC GCTTGAGGTT CAGCAGGGCG GCAGCATCAC CGGCAATATG 
ACCCACTCGG GCGGCAGCCT GACGTCTAAT GGCATTGTGG CGCATACCCA CCAGCACAGC 
GGCGTCCAGA GCGGCGGCGG CACAACAGGA GGCCCATTAT GA
 
Protein sequence
MNTYDYLSEI QRTLRNLIRI GVVTDVDTQQ ARCRVQTGGI TTGWLNWLSR RAGSSREWWA 
PSTGEQVLLL AIGGELNTAF VLPGIYSNQH PAPSTSADAC HIQFPDGAVM EYEPATGALI 
VAGIKTASVT AAESVVVTTK NVTVNAIERI TLATPEVVCT HKLITQTLEV QQGGSITGNM 
THSGGSLTSN GIVAHTHQHS GVQSGGGTTG GPL