Gene Dd703_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1950 
Symbol 
ID8090546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2316273 
End bp2317277 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID644836028 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002987562 
Protein GI242239381 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGC AGGAAAATAC GAAGGTATTG CTGGAAGTCG ACGAGCTTAA AGTGCATTTC 
GACATTCGCG ACGACAAACA GTGGTTTTGG CAACCGGCCA AAAAACTCAA AGCGGTGGAT
GGCGTCACGC TGCGTCTGTA CGAAGGGGAA ACGCTGGGCG TCGTCGGTGA ATCCGGCTGC
GGCAAATCCA CGCTGGCCCG CGCCATTATC GGTCTGGTTA AGGCAACCAG CGGGCGTATC
AGCTGGCTGG GGAAAGACCT GCTCGGCATG AGTGATGCAC AGTGGCGCGA TGTTCGCAGT
GATATTCAGA TGATTTTCCA GGATCCGCTG GCGTCGCTGA ACCCACGCAT GACGATAGGC
GAAATCATCG CTGAACCGTT GCGTACTTAC CATCCGCAGA TGTCGCGTCA GGATGTGAAG
GATAAAGTCA AAGCGATGAT GATGAAGGTG GGGCTGTTGC CGAACCTGAT CAACCGCTAT
CCGCATGAGT TTTCCGGCGG GCAGTGCCAA CGCATCGGTA TCGCGCGTGC GCTGATTCTG
GAGCCTAAGC TGATTATTTG CGACGAACCG GTATCGGCGC TGGATGTGTC CATTCAGGCT
CAGGTGGTGA ATTTGTTGCA GCAGTTACAG CGGGAGATGG GGCTATCGTT GATTTTTATT
GCACATGATC TGTCTGTAGT GAAACACATT TCCGATCGCG TGCTGGTGAT GTATCTGGGC
CATGCGGTGG AACTGGGAAC CTATGACGAG CTGTACCATA ATCCCCAACA TCCTTACACC
AAAGCACTGA TGTCGGCGGT TCCCATTCCC GATCCGGATA AGGAGCGCGA TAAGCAGATT
CAGTTGCTGG AGGGGGATTT GCCGTCGCCG ATCAATCCGC CCAGCGGTTG TGTCTTCTGC
ACGCGCTGCC CGGTCGTCGG GCCTGAATGT GTGAAAACCC GGCCGGTGCT GGAGGGCAGT
TTCCGCCATG CGGTGTCCTG CCTGAAGGTT GAGCCGATGG CGTAA
 
Protein sequence
MSQQENTKVL LEVDELKVHF DIRDDKQWFW QPAKKLKAVD GVTLRLYEGE TLGVVGESGC 
GKSTLARAII GLVKATSGRI SWLGKDLLGM SDAQWRDVRS DIQMIFQDPL ASLNPRMTIG
EIIAEPLRTY HPQMSRQDVK DKVKAMMMKV GLLPNLINRY PHEFSGGQCQ RIGIARALIL
EPKLIICDEP VSALDVSIQA QVVNLLQQLQ REMGLSLIFI AHDLSVVKHI SDRVLVMYLG
HAVELGTYDE LYHNPQHPYT KALMSAVPIP DPDKERDKQI QLLEGDLPSP INPPSGCVFC
TRCPVVGPEC VKTRPVLEGS FRHAVSCLKV EPMA