Gene Dd703_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1872 
Symbol 
ID8090468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2227234 
End bp2228094 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID644835953 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002987487 
Protein GI242239306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAA CGCTGACGGC CTACCTGCTG CTGTTGCCGG GGGTGGGCGC CATCGTGCTG 
TTTATGATCG CCGTCTTGGG GATGGCGGTG TCGCAATCGG TGGGTTTTTT CAACTTTGCC
GGGGAAAGCG GGTTCTCGCT GCGGTTCTGG CAAACCATGT TGGCAGATGA ACAGCTCTGG
CGGTCTTTTT TCTACTCAGC GCGGATAGCG ACGCTGAGCG CGTTGTTATC GGTCGCGGTG
GCGTATCCGT TGGCCATCTG GCTGCGTAAG CCGTTTCCCG GTTCCGACCT GCTGCAGGCG
TTGCTCAAGG CGCCTCTGTT GGTACACGGC CTGACGGCCG CTTTTCTCTT CGTCAATTTC
ATCGCGTATC AGGGGTTTCT GAATCTGGCG CTGGTGCGTC TGGGGATAGG GTCGCGCCCC
GTGCGCCTGC AGAACGACCC TTATGGCATC GGCGTCGTGA TACTCCAGGT TTGGAAACAG
ATGCCGTTCG CGCTGCTGCT AATGAGCGGT GCCGTGCGGG CGGTGGGCGA TACGTTGCTG
GAGGCCGCGC GTAATCTGGG CGCCGGAACC TGGGCGCGCT TTCATCGTGT GGTGCTGCCA
TTGACGTTGC GGTCGCTACA GACTGCGCTG GTGCTGATTT TCATCGGCGC CGCCGGGGAT
TTTTCGTTCC AGTCCGTCGC AGGCCCCGTC AGTGTCAACT CCATGGCGCA GTTTATGTTG
CGCGTGCAGC AAAGCGGCGC GGAGGGATGG AATCAGGCGG CAGTGGTGGC GGTGATGTTG
ATGGCGTTAT CGCTGTTGGG CGCCGGCGTA CTGGCCGCGT GTGCCGGCGT ATTGGTACGG
CGTAGCGGGA GGGGAAGATG A
 
Protein sequence
MKTTLTAYLL LLPGVGAIVL FMIAVLGMAV SQSVGFFNFA GESGFSLRFW QTMLADEQLW 
RSFFYSARIA TLSALLSVAV AYPLAIWLRK PFPGSDLLQA LLKAPLLVHG LTAAFLFVNF
IAYQGFLNLA LVRLGIGSRP VRLQNDPYGI GVVILQVWKQ MPFALLLMSG AVRAVGDTLL
EAARNLGAGT WARFHRVVLP LTLRSLQTAL VLIFIGAAGD FSFQSVAGPV SVNSMAQFML
RVQQSGAEGW NQAAVVAVML MALSLLGAGV LAACAGVLVR RSGRGR