| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1610 |
|---|
| Symbol | |
|---|
| ID | 8090204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1895079 |
|---|
| End bp | 1896149 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644835693 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002987229 |
|---|
| Protein GI | 242239048 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.42043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ACCTCAAAAT ACGAGAAATT GCCCAGCAAA CCGGCTTCTC CATCAGCACG
GTATCACGGG TGCTGGCTGG GAAATCCAAC ACCAGCGAAA CCGCCAGAAC CCGCATACTG
ACCTCGGCCC GGCAGCATGG CGTGATGGAC GATCTGGTCA GCGGTCGGCT CTTTATGAAC
AGCCTGACGG TGTTCGCGCC GGAACGCGCG TTCAACAGCC GCACCGATAT TTTCTATCAC
AAGGTTTTGC AAGGGATTCA CGATGCGCTC GATGCCTACG ACGTGCGTTT GAAATACTGC
GGGCTGGCGG AAAATGACAG TGATGTCACG CTGTTTCTGG AAAAAATGTC CTCACCGGAC
GCTGAAGGCG CCGTGTTGAT CGGTATTGAT GATCCCTACA TCCATGCACT GGCCGCTGAT
TTGGGCAAAC CCTGTGTACT GATCAACTGC TTTGACCGCA AAATGAAGCT CGCTGGCGTT
TCGCCGGCTC ATCGGCTCAT CGGCGAATTC GCCGCCAACT ATCTGGTTGA ACAGGGGCAT
CGGCAGATCC TCACGCTGCT TTGTCTGCGC CGCTATACCA TGGAATGGCG TCTGGCGGGG
ATCCGCGATG CCTATCAACA ACATAACCTG CCATTTTCCG ATGATGCCTG CCTGCTTACG
ACCCAAGGGT TTAGCACCTC CGAGGCCGAA CTCGCCGTTA GCCGCTATCT TGCCGATACG
CCGCAGGATT GCTGGCCGAC GGCCCTGTTG GTCGGTGGTG ATTTTATGTG CGTGGGCGCG
GTCAATGCGC TGCTGAAAGC CGGGTTGCGC GTCCCGCAGG ATATTTCCAT CATGAGCATG
GACAGCGCTA ACCTGGCCGC CGTACAGGAT ATCCCCCTCA CATCCGTGTT GGTGCCGCGG
GAAGAGTTGG GGCGCGAAGC CGTGCGGCTG CTGCAATTGC AACTGCTGCA ACCGGGTCGC
CCCGCAGGAA ATATGATGCT GAACGGTACG CTCATCGTTC GGGAGTCGGT AAAACGGATC
CGCGCCAGCA AACAGCATTG CCCGGTGCAG GATTACGATC TCTATGACTG A
|
|---|
| Protein sequence | MKKNLKIREI AQQTGFSIST VSRVLAGKSN TSETARTRIL TSARQHGVMD DLVSGRLFMN
SLTVFAPERA FNSRTDIFYH KVLQGIHDAL DAYDVRLKYC GLAENDSDVT LFLEKMSSPD
AEGAVLIGID DPYIHALAAD LGKPCVLINC FDRKMKLAGV SPAHRLIGEF AANYLVEQGH
RQILTLLCLR RYTMEWRLAG IRDAYQQHNL PFSDDACLLT TQGFSTSEAE LAVSRYLADT
PQDCWPTALL VGGDFMCVGA VNALLKAGLR VPQDISIMSM DSANLAAVQD IPLTSVLVPR
EELGREAVRL LQLQLLQPGR PAGNMMLNGT LIVRESVKRI RASKQHCPVQ DYDLYD
|
|---|
| |