Gene Dd703_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1572 
Symbol 
ID8090166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1859332 
End bp1860252 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content50% 
IMG OID644835657 
Productlipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 
Protein accessionYP_002987193 
Protein GI242239012 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.811424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC TCCCTTCTTT TAATCGTTCT TTGCTGCACC CTCGCTATTG GCTCACCTGG 
TTGGGGATTA TTGTGCTCTA TCTGCTGGTT TTACTGCCCT ATCCCGTCAT CTATCGCCTT
GGCACCGCGT TGGGCCGTTT GTCCATGTCC GTTCTCAAAC GGCGGGCCAG GATTGCTGAT
CGTAATCTGC AGCTCTGCTT CCCAAATATG TCTGAAGCAG AGCGACTCAT CCTGGTGAAA
AAAAATTTCG AATCTGTCGG TATGGGGTTG ATGGAAACCG GTATGGCATG GTTTTGGCCC
GACTGGCGGA TTAATCGCTG GTTCAGCGTA AGTGGTATTG AGCACATGCT CCCGTTGCGT
GAACAAAAAC GGGGCATTTT GCTGATCGGG CTACATTTTC TCACGCTGGA ATTAGGTGCG
CGGATCTTCG GTATGCAAAA CGCGGGGATT GGCGTTTATC GTCCGAACGA CAACAAATTG
CTCGATTGGC TGCAAACATG GGGAAGAATG CGCTCGAATA AATCTATGTT GGATCGCAAA
GATATCAAAG GCATGATCAG AGCCTTGAAA CAGGGTGAGA TTATATGGTA CGCCCCGGAT
CATGATTACG GCCCACGCAG CAGTGTTTTT GTTCCTCTGT TTGCGGTAGA TAAAGCCGCG
ACGACGGTAG GCAGTTATAT GCTAGCCCGG GCCGCCAAAC CTGCGATCGT GCCCTTTGTC
CCCCGCCGTT TACCTGACGG CAAAGGTTAT GAGTTGCTGA TTCAACCCGC AGAACTGGCG
TTCCCGCTGG AGAGCGAAGA GTCTACTGCG GCGTGGATGA ACAAGATTAT TGAAAAAAAT
ATTCTGTTGG CACCAGACCA ATACATGTGG CTACATCGAC GCTTCAAAAC TCGCCCGACG
GGTGAAACAT CATTGTACTA G
 
Protein sequence
MTQLPSFNRS LLHPRYWLTW LGIIVLYLLV LLPYPVIYRL GTALGRLSMS VLKRRARIAD 
RNLQLCFPNM SEAERLILVK KNFESVGMGL METGMAWFWP DWRINRWFSV SGIEHMLPLR
EQKRGILLIG LHFLTLELGA RIFGMQNAGI GVYRPNDNKL LDWLQTWGRM RSNKSMLDRK
DIKGMIRALK QGEIIWYAPD HDYGPRSSVF VPLFAVDKAA TTVGSYMLAR AAKPAIVPFV
PRRLPDGKGY ELLIQPAELA FPLESEESTA AWMNKIIEKN ILLAPDQYMW LHRRFKTRPT
GETSLY