| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1490 |
|---|
| Symbol | |
|---|
| ID | 8088218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1760449 |
|---|
| End bp | 1761636 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835573 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_002987112 |
|---|
| Protein GI | 242238931 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0238943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACGC TATCAGCCAC TACCCACGCT CTGCACTCCC GTTCACTACT GAACGACGAT
TTTCTCTTCC TGTCGCCGCA AGGCAGTCTG CACACCCGAG GATGCTACGC TTCGCTGAGC
GCATCGACAG AAGATGGCGG CGATCTTGAG GGTGCCTTCC AGCAGCAGGT TTCCGGCCTG
TTTGCCGCAG CCCGGCAGGA TGGATTGCCG CACCCGTTGC TGGTCGGCGC CATTCCATTC
GACAAACGCC AGCCGGCCCA CCTGTTCATT CCGCAGCACA CCCGCTGGTT CCCACGCGAA
GAGCTGCAAT CGCTTGACGT CGCGGACACG CCGATCGCCA TCCGCCGGTT GCGGGAATCC
CCGGAACACG AGGCCTTTTG CCGCATGGTC AACGCCGGCG TGGCCGATAC CCGTGAAGGT
CGCCTGAACA AAATCGTCTT GTCCCGTCTG CTGGATATCG ATACCGACCA GCCGCTGGAT
TCCATCCAGA TGCTGTTGAG ACTTAATCGG CAGAACCCCT GGAGCTACAA TTTTCATCTG
CCGCTGGCGC AGGGCGCGCT GCTGGGCGCC AGCCCGGAAC TGTTGCTGTA TAAACGCGGC
AACGACGTGC TGTCGCAACC GCTGGCGGGC TCAGCCCGGC GCAGCGACGA TCCGCTGGAA
GATCAGCAAC TGCGCCAATC GCTGATGCAG TCGGGCAAAG ACCACCACGA ACACCGTATC
GTCACCGAAG AGATCAGGCG TCTGCTCGCT CCGCGTTGCC AGACGCTAAC GCTGCCGGAC
GCACCGACAC TGCTCAACAC CCCGGTGCTG TGGCATCTGG CAAGCCGCAT CAGCGGTATC
GTGCGCAATC CGCAGGAAAA TGCGCTGTCG ATGGCTTGCC TGCTGCACCC GACCCCGGCG
CTGTGCGGCG CGCCCACACC GGCGGCCAGA GAACGTATCG CCGAGCTGGA GCCCTTTACC
CGGGGACTGT TCGGCGGCAT CGTCGGTTGG TGCGACGCAC AAGGTAACGG CGAGTGGGTT
GTCACCATCC GCTGCGGCGA AATACGCCAT CATCGCGTTC GGCTGTTCGC CGGCGCCGGC
ATCGTGCCGG ACTCGCAACC GGTTAGCGAA TGGCATGAAA CCGGCGTGAA ACTGAGCACC
ATGCTGCGCG CCTTCGGCCT GCGTCAGGCC CAGGAGTGTG CCGCATGA
|
|---|
| Protein sequence | MSTLSATTHA LHSRSLLNDD FLFLSPQGSL HTRGCYASLS ASTEDGGDLE GAFQQQVSGL
FAAARQDGLP HPLLVGAIPF DKRQPAHLFI PQHTRWFPRE ELQSLDVADT PIAIRRLRES
PEHEAFCRMV NAGVADTREG RLNKIVLSRL LDIDTDQPLD SIQMLLRLNR QNPWSYNFHL
PLAQGALLGA SPELLLYKRG NDVLSQPLAG SARRSDDPLE DQQLRQSLMQ SGKDHHEHRI
VTEEIRRLLA PRCQTLTLPD APTLLNTPVL WHLASRISGI VRNPQENALS MACLLHPTPA
LCGAPTPAAR ERIAELEPFT RGLFGGIVGW CDAQGNGEWV VTIRCGEIRH HRVRLFAGAG
IVPDSQPVSE WHETGVKLST MLRAFGLRQA QECAA
|
|---|
| |