| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1469 |
|---|
| Symbol | |
|---|
| ID | 8088197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1739717 |
|---|
| End bp | 1740541 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644835552 |
|---|
| Product | general secretion pathway protein C |
|---|
| Protein accession | YP_002987091 |
|---|
| Protein GI | 242238910 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3031] Type II secretory pathway, component PulC |
|---|
| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.954989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCT CACAATTGCC ACCGTTATCA CCGCCTGTCG TCAGACGGGT TTTGTTGGGG
TTAGTGCTGT TGCTTATTTG TCAGCAACTG GCAATGCTGT TCTGGCGCGC CGGATTCCCG
GACAACGCGC CAGCTCCCAA CTCACAGGTC ATGCCGGCGC AGGCGCGGCA ACAGCCCGTC
CGGCTGAGCG ATTTCACGTT GTTCGGCATT TCTGCGGAAA AAACGCAGCC TGGCGCGCTG
GATACTGCGC AAATGACCAA TCTGCCGCTT TCTTCTCTCA AACTCATGCT GACGGGCGTC
ATGGTCAGCA CGAACGAATC ATCCCGCTCG ATAGCGATTA TCAGCAAGGA CAATCAACAG
TTTAGCCGGG GAATCAACGA GGATGTCCCA GGCTATAACG CCCGCATTGT TTCTATTCGT
CCGGATAGGG TCATTCTGCA ATATCAAGGG CGTTATGAAG CACTTGAACT GTATGTGTCG
GACGGCGGCG ACAGCGATGC GTCGATCCCC ATGTCGCAGG TCAAAGAGCA ACTGCAGCAA
CGAGCCTCCA CCAATATGAG CGATTTCGTT TCCTTCTCGC CGATCATGAA TGGCGACCGG
TTGCAAGGGT ATCGCTTGAA TCCGGGGCCG CAGAGTGATG CCTTCTACCG CGTGGGGTTG
CAGGATAACG ATCTCGCCGT GGGGATGAAT GGGTTGGATT TACGCGATCA GGATCAGGCC
AAGAAAGCCA TGGAGCGGAT GGCTGACGTA CATAATTTTA CCCTGACCGT GGAGCGAGAC
GGCCAACGGC AGGATATCTA TCTGGAACTT GGGGGAGACG AGTAA
|
|---|
| Protein sequence | MKISQLPPLS PPVVRRVLLG LVLLLICQQL AMLFWRAGFP DNAPAPNSQV MPAQARQQPV
RLSDFTLFGI SAEKTQPGAL DTAQMTNLPL SSLKLMLTGV MVSTNESSRS IAIISKDNQQ
FSRGINEDVP GYNARIVSIR PDRVILQYQG RYEALELYVS DGGDSDASIP MSQVKEQLQQ
RASTNMSDFV SFSPIMNGDR LQGYRLNPGP QSDAFYRVGL QDNDLAVGMN GLDLRDQDQA
KKAMERMADV HNFTLTVERD GQRQDIYLEL GGDE
|
|---|
| |