Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1339 |
Symbol | |
ID | 8087901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1530233 |
End bp | 1530958 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644835420 |
Product | putative periplasmic ligand-binding sensor protein |
Protein accession | YP_002986963 |
Protein GI | 242238782 |
COG category | [S] Function unknown |
COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.133889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATCTG AAGAACAACG CCTTATTGAT GGTCTGTTTA GCCGCCTGAA AGACGCCGAG ACCAAAACGG GGCCGCGGGA TCTCAAGGCA GAACAGCAAA TTAGCGACCA CATCCGCCAA CAGCCCGCCG CACCTTATTA CATGGCGCAG GCAATGATTA TTCAGGAAGC GGCGCTGAAG CAGTTGGATC AGCGGGTCAG AGAGCTGGAA AACGAAGTCA ATCGGCTAAG GCAGGAAGCC GCCCGCCCGC AACAAAGCAG CGGCGGTTTT CTTGCCGGGC TGTTCGGCGG CGGTCGCACC GCCGCACCGG CCCCGCAGCA GTATCAGCAA CCGGTCAACA ACGGCTGGGG CAACCAACCC GCACCGGGAT ACGGCGCGCA GCCAGGATAT AGTGCTCAAC CGGGATATGC CCAACCGGCG CCGAGCCGGG CCGGCGGTTT CCTGGGCGGC GCGTTGCAAA CTGCGGCAGG CGTTGCCGGC GGCGTGGTAC TGGCGGATAT GCTGACCAGC ATGTTCCACA GTTCCAAACC GCAGGAAATC GTCAACATTA TTGAGGAAAC ACCGCAAAAC CTCAGCGACG GTTTACAGAA CACCGGCATG GAAAGGCTCG ACGCCTTCGG TTCGGACAAC GGCAGCGATT TTCTCAACGC CGGTTACGAT TCGCAGGACA GCGGTTTTGA TGCATTCGGC AGCGACAGTT ACGACGACGA CGATTCCTAC CTGTAA
|
Protein sequence | MQSEEQRLID GLFSRLKDAE TKTGPRDLKA EQQISDHIRQ QPAAPYYMAQ AMIIQEAALK QLDQRVRELE NEVNRLRQEA ARPQQSSGGF LAGLFGGGRT AAPAPQQYQQ PVNNGWGNQP APGYGAQPGY SAQPGYAQPA PSRAGGFLGG ALQTAAGVAG GVVLADMLTS MFHSSKPQEI VNIIEETPQN LSDGLQNTGM ERLDAFGSDN GSDFLNAGYD SQDSGFDAFG SDSYDDDDSY L
|
| |