Gene Dd703_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1272 
Symbol 
ID8087834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1454905 
End bp1456179 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID644835353 
Productaminotransferase class-III 
Protein accessionYP_002986896 
Protein GI242238715 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGT CCATCACATC ATCGACAACC GCCATGCTGG AGCGTCGGCA CCGGTTGCTT 
GGCGCCGGTT ATCGCTTGTT TTACCAACAG CCGGTACACG CCGTGCGCGG CGAAGGCGTC
TGGCTGTACG ACGCCGACGG CAAACGTTAC CTCGATGGTT ACAACAATGT CGTGTCCGTC
GGTCACTGTC ACCCGGAAGT GGTGGCGGCC ATCGCCCGTC AGGCCTCGAC GCTTAACACC
CACACCCGTT ACATCACCGA TGCCATTCTG GATTTCGCCG AGGACTTCCT ACAGGAGTTC
CCCGACGAAC TCGGCAACAT CACCATGACC TGCACCGGCA GCGAATCCAA CGATCTGGCG
TTGCGCATCT CGCGTCAGAC CACCGGCAAC CGCGGCATAA TAGTGACCCG CTGGGCTTAT
CATGGCGTTA CTTCACTGTT GGCGGGGCTG TCGCCGTCGC TGGGCAGCGG TACGCCGTGC
GGCGAGCATG TCTGGTTGAT TGACCCGCCG GACGGTTATC GCCACGCCCC CGGCCAGATG
CTGGCCAGCG TAAACCGGGC GCTGGAGGAC ATGGCAACGC AGGGCATTCG CCCCGCCGCG
TTGTTGTTCG ATACCCTTTT TTCCAGCGAC GGTATCTTCG GCGCCGACGC GAAAGAAATA
CAACAGGTGG TCGCGCAGGT GCGCGCGGCA GGCGGCCTGT ATATCGCTGA CGAAGTGCAG
GCCGGTTTCG GTCGTACCGG CTCGCATCGC TGGGGGTTCG CCCGTTACGG CGTGACGCCC
GACCTGGTCA GCATGGGCAA ACCGATGGGC AACGGCCATC CGGTGGCGGC GGTAGTGGGT
AGACCGGCAT TGTTCGATGC CTTCGGTAAT GCCCAACGCT ACTTCAATAC CTTCGGCGGC
AACCCGGTTT CCTGCCAGGC GGCGCAGACG GTACTGAACA TCATTCGTCG CGATCGGCTA
CAGGAAAATG CGGCGCAAGT GGGTAGCTAT ATTGAAGCCG GGCTGCGACG GCTGGCCAAA
CGCCATGAGC GGATAGGCGA CATTCGCGCC TACGGTTTTT TCATCGGCGT GGAACTGGTG
ACAAGCCGAC AAAGCCGACA GCCCGCCACC GATGACGCCG TAAGACTGGT AAACGGTATG
CGTCAGGCCG GCGTATTGAT CAGCGCCACC GGCCCGCATG GAAATATCCT GAAAATCCGG
CCGCCGCTGG TGTTCACGCA GCAACACGCC GATATCCTGC TCGACAGCCT GGATACGGTG
ATGGCGGCGT TATAG
 
Protein sequence
MTASITSSTT AMLERRHRLL GAGYRLFYQQ PVHAVRGEGV WLYDADGKRY LDGYNNVVSV 
GHCHPEVVAA IARQASTLNT HTRYITDAIL DFAEDFLQEF PDELGNITMT CTGSESNDLA
LRISRQTTGN RGIIVTRWAY HGVTSLLAGL SPSLGSGTPC GEHVWLIDPP DGYRHAPGQM
LASVNRALED MATQGIRPAA LLFDTLFSSD GIFGADAKEI QQVVAQVRAA GGLYIADEVQ
AGFGRTGSHR WGFARYGVTP DLVSMGKPMG NGHPVAAVVG RPALFDAFGN AQRYFNTFGG
NPVSCQAAQT VLNIIRRDRL QENAAQVGSY IEAGLRRLAK RHERIGDIRA YGFFIGVELV
TSRQSRQPAT DDAVRLVNGM RQAGVLISAT GPHGNILKIR PPLVFTQQHA DILLDSLDTV
MAAL