Gene Dd703_1227 details

Gene Information

• Locus tag: Dd703_1227
• ID: 8087788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 1407703
• End bp: 1409508
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644835309
• Product: phosphogluconate dehydratase
• Protein accession: YP_002986853
• Protein GI: 242238672
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTG TGATTGAACA GGTTGCCCGC CGGATTGCCG AACGTAGCCG CCAGACCCGT 
GACCGCTATC TGACGCGGAT GCGCACGCAG GGTGCGAACG GTAAAACCCG TAAGCAGCTC 
TCCTGCGGCA ATCTGGCGCA TACCGTCGCC GCCTGCTCTT CGTCGCAGAA GAGCGCCATT 
CTCGATTTCA CCCGCGCCAA TGTCGGCATC ATCACCGCCT ACAACGATAT GCTGAGCGCG 
CATCAGCCGT ATGGCGGCTA CCCGGATCAG ATCAAAGCGG TACTGGCGGA ACTGGGGCAC 
AGCGCCCAGA TTGCCGGCGG TGTGCCTGCC ATGTGCGACG GGATTTCGCA AGGGCAGGAC 
GGCATGGATC TGTCGCTGTT TTCCCGCGAT GCCATCGCAC AGGCGACGGC GATCTCTCTG 
AGTCACAATA CATTTGATGC GACGTTGTTG CTCGGCGTGT GCGACAAGAT CGCGCCCGGC 
CAACTGATGG GGGCATTGTC GTTCGGCCAT CTGCCGACCG CGTTTGTGCC GTCCGGCCCG 
ATGTCGACCG GGATCAGCAA CGACGAAAAA GTGAAGGTCA GACAGCAGTA TGCGGCGGGT 
CAGGTCGGGA AAGACGCCCT GTTGCAGATG GAGTGCGATG CCTATCACTC GCCGGGCACC 
TGCACCTTCT ACGGTACGGC CAATACCAAC CAACTGGTGT TTGAAGCCAT GGGCTTGATG 
CTGCCAGGAG CGTCGTTTGT TGCGCCGAAT ACGCCGCTGC GTGCGGCGCT GACGCGCATG 
ATCGCCGAAC AGGTCGCGGC GCAGGCGCAG AACGGCACGC AGTATCGTCC GCTGTATCAG 
GTGGTGGATG AAAAAGCGAT CGTCAACGGC CTGGTGGCGC TGCTGGCGTC GGGCGGTAGC 
ACCAATCACT CGATCCATCT GGTGGCGGTG GCGGCGGCGG CGGGGTTCAT GCTGACCTGG 
GACGACCTGG ACGCGCTGTC GCAGGCGGTG CCGCTATTGG CGAAGATGTA CCCGAACGGC 
CCGGCGGATA TCAACGAATT CCAGCAGGCC GGCGGCGTGC CGGCGCTGAT GAGCGCGCTG 
GCGGAACGCG GTTTACTGCA TATGGAGGCG ACACCGGTCT TTGGCGTGAT GGCGGACTAC 
CTGAAAACGC CGCAACTGGA GAACGGACAG GTGATTTATC GTCCTGCCGG CGCATCAACC 
AACCCGAGCG TGATTGCCGC TGCGGGCGCC TGTTTTAGCC AGCAAGGCGG CTTGAAAGTG 
GTATCGGGTA ATCTGGGGCG CGGCGTGATC AAAATCAGCG CGGTCGCGCC GGAGCACCAT 
TTCATCGAGG CTCCGGTACG GGTGTTTGCA TCGCAGCATG ATGTGGAAAA AGCCTATCAG 
GCCAACGAAT TTACCCAGGA TGTGGTGATT GTGGTGCGCT ATAACGGCCC GGCGGCGAAC 
GGGATGCCGG AGCTGCATAC ATTGATGCCG ATTCTCGGCA ACCTGATGAA AGCCGGGTTG 
AAGGTGGCGT TGGTGACGGA TGGCCGCCTG TCCGGCGCCT CCGGCAAGGT GCCGGCGGTG 
ATCCACCTCT CGCCGGAAGC GCAGCGCGGC GGGCCGCTGG CGCGTCTGCG TGACGGCGAT 
CGGGTGCGGG TTGACGCCGC CAGCGGGCGG ATGGATGTGT TGACGGATAT CAGCCAACGG 
GATAACGCGG TTATCGATCT GACGCGCGAG CATGCCGGGT CTGGCCGGGA GCTGTTCTCG 
GTTTTCCGAC AAGCGGTGTC GTCGGCAGAG CAGGGGGCGA CCATCTTCAA TTACCTGGGC 
TCCTGA 

 

Protein sequence

MNLVIEQVAR RIAERSRQTR DRYLTRMRTQ GANGKTRKQL SCGNLAHTVA ACSSSQKSAI 
LDFTRANVGI ITAYNDMLSA HQPYGGYPDQ IKAVLAELGH SAQIAGGVPA MCDGISQGQD 
GMDLSLFSRD AIAQATAISL SHNTFDATLL LGVCDKIAPG QLMGALSFGH LPTAFVPSGP 
MSTGISNDEK VKVRQQYAAG QVGKDALLQM ECDAYHSPGT CTFYGTANTN QLVFEAMGLM 
LPGASFVAPN TPLRAALTRM IAEQVAAQAQ NGTQYRPLYQ VVDEKAIVNG LVALLASGGS 
TNHSIHLVAV AAAAGFMLTW DDLDALSQAV PLLAKMYPNG PADINEFQQA GGVPALMSAL 
AERGLLHMEA TPVFGVMADY LKTPQLENGQ VIYRPAGAST NPSVIAAAGA CFSQQGGLKV 
VSGNLGRGVI KISAVAPEHH FIEAPVRVFA SQHDVEKAYQ ANEFTQDVVI VVRYNGPAAN 
GMPELHTLMP ILGNLMKAGL KVALVTDGRL SGASGKVPAV IHLSPEAQRG GPLARLRDGD 
RVRVDAASGR MDVLTDISQR DNAVIDLTRE HAGSGRELFS VFRQAVSSAE QGATIFNYLG 
S