| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1220 |
|---|
| Symbol | |
|---|
| ID | 8087781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1396735 |
|---|
| End bp | 1397727 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835302 |
|---|
| Product | protein of unknown function DUF1611 |
|---|
| Protein accession | YP_002986846 |
|---|
| Protein GI | 242238665 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3367] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA AAAAACCTTA TTTGTTGTTT TTAGGTGACG CTCATGACCA ACTGGCCGCC
AAGGTGGCAA TTGGTATTAA ACAATGGCAT CCGGAATATT GCGTCGGTCA ATACCGTATG
CCAGGTTGCC ATGCCGATTG CGATTTGCCG GATTTGGACA TCCCCGCCGC CCGCGCCGCC
GGCGCGCAAA CATTGGTCAT CGGCGTCGCC AACCGCGGCG GCATCATCTC CGAAGCCTGG
ATCGCCGTTC TGCGCCAAGC GCTGGAATGC GGCATGGATT TGGCGGCAGG CCTGCACAAT
AAACTGGCCG ACGTGCCGGA ACTGAGCGAG CTGGCAGCCC GCCTGGGGCG TTCGCTGTTC
GATGTGCGCC ATCCAACGCA AACCTATCCG GTAGCCAGCG GACGTAAACG TAGCGGCAAA
CGCCTGTTGC CGGTCGGCAC CGACTGTTCC TGCGGCAAAA TGTACACCGC GCTGGCAATT
GAAAAAGAAC TGCTGTCGCG TAACCGAAAA GCCACATTCC GCGCCACCGG TCAGACCGGG
ATCCTGATCT CCGGCGCGGG CGTCAGTATC GATGCCGTGG TTTCCGATTT CATCGCCGGC
GCGGTGGAAA CCTTAGCACC GGATAACGAT GCCGATCACT GGGACGTGAT TGAAGGCCAG
GGTTCGCTGT TCCACCCGTC GTTCGCCGGC GTCACCACCG GGATCATCCA CGGCGCGCAG
CCGGACGCCC TGGTGCTGTG CCACGAACCT ACCCGCACCC ACATGCGCGG CGTCGATTAT
CCGCTGCCGG ATCTGCAAGC CTGCATCGAC CTTAATCTGG CCATGGCGCG CCTGACCAAC
CCTCACGCTC GTTTCGTCGG CGTATCCATC AATAGCGCTC ATCTGATTGA AGCCGATGCG
CTGTCTTATA TGACGAAACT GGAACAACAA CTTGGCCTAC CCGTGGTGGA TCCGTTCCGT
CAGGGCGTTG GGCGCATCGT CGACCAACTC TGA
|
|---|
| Protein sequence | MNIKKPYLLF LGDAHDQLAA KVAIGIKQWH PEYCVGQYRM PGCHADCDLP DLDIPAARAA
GAQTLVIGVA NRGGIISEAW IAVLRQALEC GMDLAAGLHN KLADVPELSE LAARLGRSLF
DVRHPTQTYP VASGRKRSGK RLLPVGTDCS CGKMYTALAI EKELLSRNRK ATFRATGQTG
ILISGAGVSI DAVVSDFIAG AVETLAPDND ADHWDVIEGQ GSLFHPSFAG VTTGIIHGAQ
PDALVLCHEP TRTHMRGVDY PLPDLQACID LNLAMARLTN PHARFVGVSI NSAHLIEADA
LSYMTKLEQQ LGLPVVDPFR QGVGRIVDQL
|
|---|
| |