| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1210 |
|---|
| Symbol | |
|---|
| ID | 8087771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1384416 |
|---|
| End bp | 1385228 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644835292 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_002986836 |
|---|
| Protein GI | 242238655 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TTTGGCTGAT GTTATTGCTG TTGCCCGGTT CGCTGCTGGC GGCGGAGCGC
ATCGTCGCCA TCGGCGGCGA CGTCACCCAG ATCGTGTTTG CGCTGGGCGC GGGCGGGCAA
GTGGTCGCCC GCGATAGTAC CAGCCTGCAT CCGGCGTCCG TGAAAACCTT GCCGGATGTG
GGGTATATGC GCCAGCTGAA TGCGGAGGGC ATCTTGTCGA TGAAGCCCAC GCTGGTACTG
GTTAGCGCGT TGGCCCAGCC ATCGGCGGCG CTGGAGCAGG TTGCCGGGCG CGGCGTGCGC
GTCGTCGCCG TGCCCGCGCC GCAGAGCTTA TCCGGCATCA ATACCAAGAT TACGGCCATT
GCCGAGGCGC TGGGCATTGC GGCTAAGGGC CGCGATCTGA CGCAACAGCT TGATGCACAG
CTGGCGGCGC TGCCTTCCCA ACCGTTGCCG ACGCGAGTGC TGTTTGTGCT CAGCCATCAC
GGCATGTCGG CGATGGCGGC CGGGCAAGGT ACCGCCGCCG ACGCGGCGAT TCGCGCCGCC
GGGTTGCAGA ACGCCATGCA GGACGTCAAT CGCTACCAGC CGCTGTCGCA GGAAGGTGTG
GTCGCCAGTC AGCCTGATTG GGTGGTGGTG ACGACGGACG GTATGCGTTC GCTGGGCGGC
GGTGATATCT GGGCATTGCC GGGGCTGGCG ATGACGCCGG CGGGACGGCA ACACCGTGTG
GTGGTGGTGG ACGATATGGC GATGCTGGGC TTCAGTCTGG ACACGCCCGC AGAGCTGCTG
CGCCTGCGTC AAACGGTGGA AGCCGGACAG TGA
|
|---|
| Protein sequence | MKRFWLMLLL LPGSLLAAER IVAIGGDVTQ IVFALGAGGQ VVARDSTSLH PASVKTLPDV
GYMRQLNAEG ILSMKPTLVL VSALAQPSAA LEQVAGRGVR VVAVPAPQSL SGINTKITAI
AEALGIAAKG RDLTQQLDAQ LAALPSQPLP TRVLFVLSHH GMSAMAAGQG TAADAAIRAA
GLQNAMQDVN RYQPLSQEGV VASQPDWVVV TTDGMRSLGG GDIWALPGLA MTPAGRQHRV
VVVDDMAMLG FSLDTPAELL RLRQTVEAGQ
|
|---|
| |