Gene Dd703_1155 details

Gene Information

• Locus tag: Dd703_1155
• Symbol: tolA
• ID: 8087716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 1320809
• End bp: 1321978
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644835237
• Product: cell envelope integrity inner membrane protein TolA
• Protein accession: YP_002986782
• Protein GI: 242238601
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3064] Membrane protein involved in colicin uptake
• TIGRFAM ID: [TIGR02794] TolA protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAAAGG CAAACGAACG AAACGATAAG CTAAGGCGCG CCATTATTAT ATCGGCCGTC 
TTGCACGTCA TTCTGATTGT GTTGCTGATC CTGAGTTCAC TGAATCAGAA GATGGACGAC 
GCCAGTGCAG GTGGCGGCGG GTCATCCATC GATGCGGTGA TGGTTGACCC TGGTGCAGTG 
GTCGACCAAT ACAATCGCCA GCAACAGCAG CAAAGTGATG TTCGCCGGGC CGAACAGCTT 
CGAAAGAAAC AGGCTGACCA GCAAGCTCAG GAGTTGCTGG AGAAACAGGC TGCCGAGCAA 
CAGCGTTTGA AAGAGTTGGA AAAGGAGCGC TTGCAAGCTC AGGAAGAAGC GAAACAGCAG 
GCACAGGAAC AGGCTGAGCA GCGTAAACAG GCGGAAGATG CCGCTCAAAA AGCGCGTGAG 
CAGCAGAAGC AGGCGGAAAT GGCGGCAGCC AAAGCGAAGG CTGAGGCTGA ACAGCAGGCG 
AAAGCGGCTG CTGAAGCGAA GAAGCAGGCG GAAGACGAAG CGAAAAAACA GGCTGCTGCA 
GAAGCCAAGA AGAAAGCGGA AGACGACGCG AAGAAACAAG CGGCAGCGGA GGCCAAGAAA 
AAGGCTGAGG AAGAGGCTAA GGCTAAAGCC GCCGAGTTAG CCAAGCAAAA AGCTGCGGCG 
GAAGCGAAAC AGAAAGCGGA AGACGACGCT AAAGAAAATG CGGCTGAGGC CGCTGCTGCG 
GCTAAGAAAG CCGCAGATGA CAAGAAAAAG GCCGCCACGG CAGCCGCGAA GCAGGCGGGC 
GAAGTCGATG ATTTGCTGGG AGGCCTGGCT GCATCGAAGA ATGCACCTAA AGGCGGCGGT 
AGTGCGGCCA GCGGTGGTGC TCCTGCTGGT GTTGGTAATA ATAAGAAAAG TGGCGCGTCC 
GGCGCTGCGC TTGATAGCTA TGGCAGTCAG ATCCGGTCTG CTATTCAGAG TAAATTTTAT 
GATTGGGAGT CATACAAGGG GCGTACTTGT ACGTTGCGTA TCCGGCTGGC TCCCGATGGT 
TTGCTGATTG ATGTGAAAAC GGAAGGGGGC GATCCTGCGC TGTGCCAGGC TGCAATTGCG 
GCAGCTAAAC AGGCTCGTAT ACCTAAACCA CCAAGCTCGG ATGTTTATGA CGCATTCAAG 
AACGCACCAA TAGATTTTAA ACCGCAATAA 

 

Protein sequence

MQKANERNDK LRRAIIISAV LHVILIVLLI LSSLNQKMDD ASAGGGGSSI DAVMVDPGAV 
VDQYNRQQQQ QSDVRRAEQL RKKQADQQAQ ELLEKQAAEQ QRLKELEKER LQAQEEAKQQ 
AQEQAEQRKQ AEDAAQKARE QQKQAEMAAA KAKAEAEQQA KAAAEAKKQA EDEAKKQAAA 
EAKKKAEDDA KKQAAAEAKK KAEEEAKAKA AELAKQKAAA EAKQKAEDDA KENAAEAAAA 
AKKAADDKKK AATAAAKQAG EVDDLLGGLA ASKNAPKGGG SAASGGAPAG VGNNKKSGAS 
GAALDSYGSQ IRSAIQSKFY DWESYKGRTC TLRIRLAPDG LLIDVKTEGG DPALCQAAIA 
AAKQARIPKP PSSDVYDAFK NAPIDFKPQ