| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1138 |
|---|
| Symbol | |
|---|
| ID | 8087699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1302785 |
|---|
| End bp | 1303522 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835220 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_002986765 |
|---|
| Protein GI | 242238584 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATTG ATGTAAACGT CGATCTTGGC GAAGGCGGGC AGCATGATGA AGCGCTGTTA
CAGTTAGTGA GTTCTGCCAA TATCGCCTGC GGCTTTCATG CCGGAGATGC GGATACCATG
CGTCAGGCGG TGCGCTGGGC CATCAGGTAT GGCGTCGCCA TCGGCGCTCA CCCTAGTTTC
CCTGATCGAG ACAACTTCGG TCGCGTCGCG ATGCAATTGC CGCCCGAAAC GGTATTTGCG
CAGGTGGTTT ATCAAATCGG TGCGCTGGCG GCGATCGTCA AAGCCGAGGG GGCCAGGCTG
TTTCATGTGA AACCGCACGG TATGCTTTAC AATCAGGCTG CGCGAGAGCC CGCATTGGCC
GATGCTATCG CTCGAGCGGT ACAGGCGGTG GATCCCTCGC TGTATCTGGT GGGGCTGGCG
GGAAGCGATT TGGTTCATGC GGGTAAGCAT CGGGGGCTGA AAACGCGCCA GGAAGTATTT
GCCGATCGTA GCTATCGACC CGATGGCTCG CTGGTGCCGC GGGATCAGCC GCTGGCGGTC
ATCAATAGCG ATGAATTGGC ACTGGCCCAG ACGCTGGAAA TGATACAGCG TCATCGGGTG
CGCACCAGCG ATGGCAGTTG GATTGCGGTT CAGGCGGATA CGGTCTGCCT GCATGGCGAT
GGTGAGCATG CATTGGCGTT CGCCCGCCGG TTACGGCATA GCTTTAGTCA GTATGGCATT
CGGGTTACGG CCCAATAA
|
|---|
| Protein sequence | MVIDVNVDLG EGGQHDEALL QLVSSANIAC GFHAGDADTM RQAVRWAIRY GVAIGAHPSF
PDRDNFGRVA MQLPPETVFA QVVYQIGALA AIVKAEGARL FHVKPHGMLY NQAAREPALA
DAIARAVQAV DPSLYLVGLA GSDLVHAGKH RGLKTRQEVF ADRSYRPDGS LVPRDQPLAV
INSDELALAQ TLEMIQRHRV RTSDGSWIAV QADTVCLHGD GEHALAFARR LRHSFSQYGI
RVTAQ
|
|---|
| |