Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0868 |
Symbol | ispF |
ID | 8090004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 991167 |
End bp | 991664 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644834939 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_002986500 |
Protein GI | 242238319 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCG GTCACGGTTT TGATGTGCAT AAGTTCGGCG GCGAGGGCCC GCTGGTGATC GGCGGGGTGC GAATTCCCTA TGAGCGCGGT TTGCTGGCGC ATTCCGATGG CGATGTTGTC TTGCATGCGG TAACTGACGC TCTTTTGGGC GCCGCCGCTC TGGGTGATAT CGGCAAATTG TTCCCGGATA CCGATCCGGC ATATAAGGGG ATCGACAGCC GCGAGTTGCT GCGTGAAGCC TGGCGTCGCA TTGTGTCCAA GGGATACGCC TTGGGTAATC TGGATGTCAC CATCATTGCG CAGGCGCCGA AGATGGCGCC GCATATTCCA CAGATGCGCG TTAATCTGGC GGAAGATTTG CAGAGCCATA TGGATGACGT CAACGTGAAG GCGACGACGA CGGAGCAACT GGGCTTTACC GGGCGCGGCG AGGGGATTGC CTGCGAAGCG GTGGTACTGT TGGTGAAAAA CGATACCGCC GGAGTGGTGG CATGGTGA
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Protein sequence | MRIGHGFDVH KFGGEGPLVI GGVRIPYERG LLAHSDGDVV LHAVTDALLG AAALGDIGKL FPDTDPAYKG IDSRELLREA WRRIVSKGYA LGNLDVTIIA QAPKMAPHIP QMRVNLAEDL QSHMDDVNVK ATTTEQLGFT GRGEGIACEA VVLLVKNDTA GVVAW
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