Gene Dd703_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0618 
Symbol 
ID8089025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp698119 
End bp698754 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID644834690 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002986251 
Protein GI242238070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTT ATTGGCATGA GTTTCTGTCA CTGGCGCTGA TTCATTTTTT AGTCGTATTG 
TCTCCGGGGG CTGATTTCGC CGTCACGGTA CGGCAGAGCG TCTGCTATGG CAGAAGAACC
GGGTTATTAA CTGCATTGGG CATCGGGGCG GGAATATCGA TTCATGTCAT GTATACCTTG
GTCGGTGTCA GCGCATTGAT GCAGGCATCA TCCTGGTTTC TGAATGTCGC TAAAATAACT
GGAGGCGGTT ATCTGTTTTA TTTGGGGATA AAATTTATCA CCAGTAAATA TTCAATGACG
GAGGATGCTT TTCAGGAAGG AAATATTATC AGCCGTCCGA GCGGGAAAAA GGCTTTTTTA
TCCGGATTTA TTACCAATGC CACTAATCCT AAGGCTACGC TATTTTTTCT GGCTATTTTT
ACCTCGGTAG TCAGTACGGC GACACCCTGG TTTATTCAGG CCGGGTATGG CGTATGGATG
TGTGGCGTAA ATGCACTGTG GTTCATGCTG GTCAGCCTGT TATTTTCACA TTCCGCTGTC
AGGGCCTATT TTCTGTCTTA CGGGCGATGG TTTGAAAGAT TAATGGGAGT GGTGTTGCTG
GCGTTCGCCG TCCGGTTGTT GATGGCGATG AGGTAG
 
Protein sequence
MTGYWHEFLS LALIHFLVVL SPGADFAVTV RQSVCYGRRT GLLTALGIGA GISIHVMYTL 
VGVSALMQAS SWFLNVAKIT GGGYLFYLGI KFITSKYSMT EDAFQEGNII SRPSGKKAFL
SGFITNATNP KATLFFLAIF TSVVSTATPW FIQAGYGVWM CGVNALWFML VSLLFSHSAV
RAYFLSYGRW FERLMGVVLL AFAVRLLMAM R