Gene Dd703_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0508 
Symbol 
ID8088832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp567262 
End bp568101 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID644834578 
Productnitrogen fixation protein NifM 
Protein accessionYP_002986141 
Protein GI242237960 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID[TIGR02933] nitrogen fixation protein NifM 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGG CGTCCGCCTG GCGGCGTTTC AGCCGTTTTC GTCTGGCGCA GGCGCGCTTT 
CACTGCGTGC CGGACGCTTT GCCGCCGCAG CATCAGGACG ACTTTCAGCG TCAGCTGGCG
CGGCAGTGTC GGCTGGAGCA GGCGGTGGTC GAGGCGGCGC TGTGCCAGTC GCTGACAGTG
ACCGATGATG TGTTGCAACT GATTGAGCAG CAATTGGCGG AGCCGCTGGC GCAGGCCGGT
TTTGCGCCTG AGGAGCGGCA GGCGGTGATT CGTCATCACG CCCTGATGGA ACTGCAACTG
ACCTGGGTGG CGGCCCAGGC GGCCGCACCT ACCGGGCAGG ACGTGGCGCT CTGGTACCGG
CAGCATGCCG ATCGTTTCCT GCGGCCGGAA CAGCGGCTGA CCCACCATCT GCTGCTGACG
GCGGAGGATG AGCGGACGGC GGCGCTGGTG CGGGCGCAGA TCCGGGGTTT CCATCGCACA
TTGTGCCGCG AACCGGCGCA GTTTGAGCGG TTGGCGCGTC GCTATTCACA TTGCCCCAGC
GCGCTGGAAG GCGGGTTGTT GGGCTGGGTG AGCCGGGGTC TGCTGTTCAG CGAACTGGAG
CAAAGCCTGT TTATGCTGCG GGAAGGGCAG GTGAGCGAGC CTGTCGAAAC GGAAATCGGC
TGGCATCTGT TGTGGTGCGA GGCGATCCGC CCGGAAGCGC CGTTGCCGGA AAGCGAAGCC
CTGCCGAAAG TCAGTGATTA TCTGTTGCGC CAGCGTCAAC GGCAGCAACA GCGACAGTGG
CTGGCGACGC TGCTGGCGGA TGAAAGCCCG GTCGGCGGCG AGACGCCGGC ACCGGAATAA
 
Protein sequence
MMAASAWRRF SRFRLAQARF HCVPDALPPQ HQDDFQRQLA RQCRLEQAVV EAALCQSLTV 
TDDVLQLIEQ QLAEPLAQAG FAPEERQAVI RHHALMELQL TWVAAQAAAP TGQDVALWYR
QHADRFLRPE QRLTHHLLLT AEDERTAALV RAQIRGFHRT LCREPAQFER LARRYSHCPS
ALEGGLLGWV SRGLLFSELE QSLFMLREGQ VSEPVETEIG WHLLWCEAIR PEAPLPESEA
LPKVSDYLLR QRQRQQQRQW LATLLADESP VGGETPAPE