Gene Dd703_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0484 
Symbol 
ID8088808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp537662 
End bp538882 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content63% 
IMG OID644834554 
Productsuccinylornithine transaminase family 
Protein accessionYP_002986117 
Protein GI242237936 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.631225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATC CCGAGTCTGT TTCCCGTCGT GATTTTGATG ACCGCATGGT GCCGGTCTAT 
GCCCCCGCCG CGTTTATCCC GGTGCGCGGC GCAGGTTCCC GCGTGTGGGA TCAGGCAGGA
AAAGAGTATA TCGATTTTGC TGGCGGCATC GCGGTCAATG CGTTAGGGCA CGCGCATCCG
GCAGCGCAGG CGGCGCTGGT TGAGCAGGCG GGCAAGCTCT GGCATATGGG CAATGGCTAC
ACCAATGAAC CGGTGTTGCG GTTGGCGAAA CAGCTGATCG ACGCCACCTT CGCCGAACGG
GCGTTTTTCT GCAATTCCGG CGCGGAAGCC AACGAGGCGG CGTTGAAGCT GGCGCGCAAA
GTGGGCCACG ACAGTGGTAT CGCCGATAAA AACCGTATTG TGGCGTTCGG CAACGCCTTT
CACGGCCGCA CGCTGTTCAC CGTCAGCGCG GGCGGGCAAC CCAAATATTC CCAGGATTTC
GCACCGCTGC CCGGCGGGAT ATTCCATGTA CCGTTTAACG ATCTGTCGGC GGCGGAAGTT
GCCGTCAATG AACGCACCTG TGCGGTGATT GTCGAGCCGA TTCAAGGGGA AGGCGGCGTA
CTGCCCGCTG ATCCGGCGTT CCTGCAAGGG CTGCGCGCCC TGTGCGATCG TCACGGCGCG
CTGCTGATTT TCGATGAAGT GCAAACCGGC GTCGGCCGTA CCGGGTCGCT ATATGCCTAT
ATGGACTACG GCGTCGTGCC GGATGTGTTG ACCACCGCCA AGGCGCTGGG CGGCGGCTTC
CCGATCGCCG CCATGCTCAC CACCGAAAAA CTGGCGCAGT CGCTATCGGT CGGGTCACAC
GGTACCACCT ACGGCGGCAA TCCGCTGGCG GCGGCGGTAG CCGGTACGGT ATTCGGCCTT
ATCAATACGC CGGAGGTGTT GGCGGGCGTA GCGGCGCGCC ACCGTCGCCT GGTGGCCGGG
TTGGATGCAT TGAATCAGCG CTATCCGGTG TTTTCCTGCG TGCGCGGCAA AGGGCTGCTG
CTGGGCGCGG TACTCAAGGA GGCGTTTGCC GGGCAGGCCA AAAAGCTATT GCGTTTGGCG
GGCGAAGAAG GGGCGATCAT GCTGATGGCG GGGCCGGATG TCGTGAGGTT TACGCCGTCG
CTGATCATCC CCGAAGCGGA CATTGACGAA GGGGTGTCGC GGTTGGCACG CGCGCTGGCG
CGATTTTGCG CCGAGTGCTG A
 
Protein sequence
MEYPESVSRR DFDDRMVPVY APAAFIPVRG AGSRVWDQAG KEYIDFAGGI AVNALGHAHP 
AAQAALVEQA GKLWHMGNGY TNEPVLRLAK QLIDATFAER AFFCNSGAEA NEAALKLARK
VGHDSGIADK NRIVAFGNAF HGRTLFTVSA GGQPKYSQDF APLPGGIFHV PFNDLSAAEV
AVNERTCAVI VEPIQGEGGV LPADPAFLQG LRALCDRHGA LLIFDEVQTG VGRTGSLYAY
MDYGVVPDVL TTAKALGGGF PIAAMLTTEK LAQSLSVGSH GTTYGGNPLA AAVAGTVFGL
INTPEVLAGV AARHRRLVAG LDALNQRYPV FSCVRGKGLL LGAVLKEAFA GQAKKLLRLA
GEEGAIMLMA GPDVVRFTPS LIIPEADIDE GVSRLARALA RFCAEC