| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0183 |
|---|
| Symbol | |
|---|
| ID | 8088738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 202688 |
|---|
| End bp | 203587 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834248 |
|---|
| Product | carboxylate/amino acid/amine transporter |
|---|
| Protein accession | YP_002985823 |
|---|
| Protein GI | 242237642 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTTAT TGGTCATCAC CACCATTGTG TGGGCATTTT CTTTCAGTCT GATCGGCGAG
TATCTGGCCG GTCAGGTGGA TAGCTGGTTT TCCGCCATGT TCCGTCTGGT GCTGGCGGCA
GCGGTGTTTC TGCCTTTTCT GCGCTGGCGA GGTTACTCCC CCAGGATTCT GGGGTTGTAT
CTGCTGATTG GCGTCTTCCA GCTGGGCATC ATGTATCTGT TCTTGTTCCG CAGTTATCTC
TATCTGAATG TGCCGACGAT TCTGTTGTTC TCGGTGATGA CGCCGTTGTA CGTCACACTG
ATTTATGACC TGTTCAGCGG CCGTCGTCTG CGTTGGGGGT ACTTGTTCAG CGCGCTGCTG
GCGGTACTGG GCGCGGCGGT GATCCATTAC CACGGTGTGA GCGATCACTT CTGGTGGGGG
CTGCTGCTGG TGCAGGCGGC GAATATCTGT TTCGCCATCG GGCAGGTGGG ATACAAACGG
TTGATGGAGT TGCATCCCAT GCCCCAGCAC AGCGCGTTTT CCTGGTTTTA TCTGGGCGCA
GCGCTGGTAA CGCTGGTCGC CTGGGGGCTG TTCGGCAACG CGGCCAGGCT GCCAACCACT
GGCGTACAGT GGGGCGTACT GGCGTTTCTC GGCGTGGTGG TTTCTGGGCT GGGGTACTTC
ATGTGGAACT ACGGCGCCAC CCAGGTGGAC GCCGGAACAT TGAGTATTAT GAACAACTTC
CACGTTCCGG CCGGGTTGCT GGTCAACTTT GCGTTCTGGC AGAAAACCCC GAACTGGACC
AGCTTTATCA TCGGTTCCGC GATTATTGCT GCGGCGCTGT GGATACACCA CCGCTGGGTC
TTGAAGCGTC CCGCACAAAC GGCAGATGCT CGCAGGCATG CTGGCGCGCC GAACGAATAA
|
|---|
| Protein sequence | MPLLVITTIV WAFSFSLIGE YLAGQVDSWF SAMFRLVLAA AVFLPFLRWR GYSPRILGLY
LLIGVFQLGI MYLFLFRSYL YLNVPTILLF SVMTPLYVTL IYDLFSGRRL RWGYLFSALL
AVLGAAVIHY HGVSDHFWWG LLLVQAANIC FAIGQVGYKR LMELHPMPQH SAFSWFYLGA
ALVTLVAWGL FGNAARLPTT GVQWGVLAFL GVVVSGLGYF MWNYGATQVD AGTLSIMNNF
HVPAGLLVNF AFWQKTPNWT SFIIGSAIIA AALWIHHRWV LKRPAQTADA RRHAGAPNE
|
|---|
| |