| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4204 |
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| Symbol | |
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| ID | 8117654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 4747041 |
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| End bp | 4749356 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644854581 |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_003006476 |
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| Protein GI | 251791755 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ATAACGCCGA CGAGCAGCGC GTCGCAAAGA TTAATGAATA TCATTTGCTC
GACTTATACT TACAGCAATC CTTTCAAAAC CAGGTCAGAT TATTTGCACG GATACTGAAT
TTTCCCTCGT CATTTATCTC GATTATCGAT CACGACAAGC AATGGCTGAT TTTCAGCGAA
GGCATCAATA TCGAATGCAC GGACCGGGAA CTGGCGTTTT GCAACACAGT GATTACCACC
GCCACCACCC TGTTTATTCC TGACACTCTG ACCAATAGCC AGTTTTGCGA ACACCCGCTG
GTGACCGGCG CCCCGCATAT CCGCAGCTAC TTTGGCATTC CTCTGGTGCT CGATAAGGTC
GTGGTCGGCA CGCTGGCGGC TATCGATTAC CAACCACGTG CACTGGATGA GACGGTACGC
GAAACCGCCG CTTTTGTCGC CAGCACCACG GAATCCCTGT TCCGATTGCA CAAAGACCGG
CTGCACCGGG AGCAGGAAAT CCGGTTGCTA AACAACTCTT CCGTGGTGCT TATCAACTGG
CAGCAAGAAA ATATGCTGCA CATTTCCTAC ATCTCCCCTA ACGCACAACA TGTTCTGGGT
ATTAGCGAAG CAGAGATCAG GCATCACAGC ACGGTGATGG AGAACTACGT CCACCCGGAC
GACTACGAAA ATCTGTTGTT TACGCTGGAT AACCACAAAA AAGGCGTGGC GAATCTGGAG
TGCGAATATC GCTTTCTGTC GCCCAAAGGA AAAACCCTGT GGATTCGCCA GCTTTCCATC
GCCAATTATC ATCACAGCGG CAAACTCAGC CACGTACAGG CGCTGCTAAT TGATAACTCC
CACCAGAAAT ACCTGCAAAA ATTACTGGTG GATACCAATA ATCAGATGCG ACTGGTGCTG
GAATCCTCCA GCCTTGGCAC CTGGGACTGG GATCTGGGGC GACACAACAT TCGCGTAAAT
AAACAGTGGT GCGAAATGAT GGGGCTCACG CAGGATCAGT TCGATTCATC AATGGATCAC
TGGCAACAGA TGATGCACCC GCTGGATCGG GAAAAAATGG TGCTGGCGGC GGAAGCCTGC
ATCACCGGCC AGGCTACGCT TATCAACGAG CAATACCGGA TGCGCCACAA TAAAGGCCAC
TGGGTATGGA TTGAAACCTA CGGCAAGGTG GTTGAATACA ATGAAAAAGG TAAACCCATC
CGGGTTGCCG GCACTCACCG CGATATCACG GAAAAGAAGC ACAAGGAACT GCAGGAAGAG
GCGGATAAAC GCCTGCTGGA ACTGATTAAT CGGGCGCAAA AGATCTTTCT GGAAAAAACG
GATATTCAGG AAGCCTGTAT GTCCATCTTT GACGACCTGC TTTCCATCTC TGAATCGGAG
TTCGGTTTCA TCGGCCAGGT CAGGGAACAC GACGGTAAGA AAGTGCTGCA TATCGTCGCC
ATTTCTAATG TCAGTTGGAA CGGCAACAGT AAAAACTCTT ACGATACCTT CCTGCAAAAT
AAACTGCAGT TCACCAGCCT GGATAACCTG TTCGGGCATG TGGTAACCAC CGGCAAACCG
GTGATCACCA ATACACCACG CGCGCACTCT GCCTCGCGCG GCGTGCCGCC GGGTCATCCA
ATTCTGCGTC AATTCATGGG GTTGCCCATC TATTTTCGTA ATGAAGTGGT GGGAATGATC
GGGTTAGGTA ACCGTTTCGA CGGTTACAAT GAACAGCAAT TGCGCTTTCT TAACCCGTTC
GTCGACACGC TGGGTTCATT GTTCTACGCG CTGGAAACCC AACGCGCCAG AGAAGAACTG
GAAGCCAAAC TGCTGGAAAT GGCCAATACA GATGTCCTGA CCGGTATCCA TAATCGGCGC
GCCTACATTC TGGAAACGGA AAAATGCTAC CGAAATCATG AGAAAAACAC CGCGCTGGCG
ATTATCGATA TCGACTTTTT CAAGAAGGTG AATGACCAGT ACGGCCATCA TGTCGGAGAC
GTGGCGATTT GCCGTCTGGC GGAGATCATT ACCAGCAAAT TACGCACCGA TGACTTCGTT
GCCAGGTTGG GTGGCGAAGA GTTCGGCCTG ATTGTGCACA ACGCCAATCT CGATAATGTG
GATGCCATCA TGAACGGTAT CCGTACCGAG GTGGAAAATA CCCTATTCAC CGTTGATGGC
TATTCCTTCC ATTTTACCGT CAGTATCGGC GCTACCTTTA TCAAACACCG CAATATTCAG
AGTCTAAAGG ATAATTTCGA AAGCGACATG AAGCGGGCCG ACGACGCGCT GTACGAAGCG
AAAAACGCCG GCCGCAATCG GGTGGTGTGG AAATAA
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| Protein sequence | MKKYNADEQR VAKINEYHLL DLYLQQSFQN QVRLFARILN FPSSFISIID HDKQWLIFSE
GINIECTDRE LAFCNTVITT ATTLFIPDTL TNSQFCEHPL VTGAPHIRSY FGIPLVLDKV
VVGTLAAIDY QPRALDETVR ETAAFVASTT ESLFRLHKDR LHREQEIRLL NNSSVVLINW
QQENMLHISY ISPNAQHVLG ISEAEIRHHS TVMENYVHPD DYENLLFTLD NHKKGVANLE
CEYRFLSPKG KTLWIRQLSI ANYHHSGKLS HVQALLIDNS HQKYLQKLLV DTNNQMRLVL
ESSSLGTWDW DLGRHNIRVN KQWCEMMGLT QDQFDSSMDH WQQMMHPLDR EKMVLAAEAC
ITGQATLINE QYRMRHNKGH WVWIETYGKV VEYNEKGKPI RVAGTHRDIT EKKHKELQEE
ADKRLLELIN RAQKIFLEKT DIQEACMSIF DDLLSISESE FGFIGQVREH DGKKVLHIVA
ISNVSWNGNS KNSYDTFLQN KLQFTSLDNL FGHVVTTGKP VITNTPRAHS ASRGVPPGHP
ILRQFMGLPI YFRNEVVGMI GLGNRFDGYN EQQLRFLNPF VDTLGSLFYA LETQRAREEL
EAKLLEMANT DVLTGIHNRR AYILETEKCY RNHEKNTALA IIDIDFFKKV NDQYGHHVGD
VAICRLAEII TSKLRTDDFV ARLGGEEFGL IVHNANLDNV DAIMNGIRTE VENTLFTVDG
YSFHFTVSIG ATFIKHRNIQ SLKDNFESDM KRADDALYEA KNAGRNRVVW K
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